Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq73220 96.9 2e-15 >seq73220 Length=12354 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 |||||| ||||| || || ||||||||| ||| |||| || | ||||| || |||| Sbjct 6724 TTCTTTCTGTATGTTGTAGTCGGCCAAAGTGCGGCCATCCTCAAGCTGTTTTCCAGCAAA 6783 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTG--TTTA-AT 39644 || | | ||| || || | || | |||||| ||||| | | |||||| || | || Sbjct 6784 GATCAGCCTCTGTTGGTCAGGAGGAATGCCTTCCTTGTC-CTGAATTTTTGCCTTGACAT 6842 Query 39645 CGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTT 39704 ||| | |||||||| ||| || || || | ||| ||||||||||| ||||| || || Sbjct 6843 TGTCAAT--TGTGTCTGAGCTCTCAACTTCAAGAGTGATTGTTTTACCAGTTAAGGTCTT 6900 Query 39705 TACGAAGATCTGCAT 39719 || || |||||||| Sbjct 6901 CACAAAAATCTGCAT 6915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346478671226252