Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq82795 150 2e-31 seq203223 141 9e-29 seq73220 132 5e-26 seq173968 125 7e-24 seq121659 123 2e-23 seq127437 118 1e-21 seq142724 114 1e-20 seq76175 114 1e-20 seq2835 114 1e-20 seq138849 104 2e-17 seq56209 104 2e-17 seq45179 104 2e-17 seq9834 100 3e-16 seq83787 91.5 1e-13 >seq82795 Length=1924 Score = 150 bits (166), Expect = 2e-31 Identities = 358/533 (67%), Gaps = 11/533 (2%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || |||||||| || ||| | ||||| || || || || ||||||| ||| || || ||| Sbjct 615 TTCTGATATTCCCCAACCCTCTTCTCGAAGAAGTTGGTCTTTCCCTGCAAAGAGATTAGC 556 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || || || || | |||||| ||| | || | || ||||| Sbjct 555 TCCATCCAGTCGAACGGATTCGAAACGTTGTACATCTTCCCGTAACCCAAGGCGCCGAGC 496 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 || | ||||| ||||| ||||||||||| ||| | | || | |||| ||| Sbjct 495 AGGCGATCGGCAACGAATTCGATGTATTGACTCATTAGAGCACTGTTCATCCCCACTAGA 436 Query 132784 -CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT 132842 ||||| || | ||| ||| || || | || || | |||| ||||| |||||| Sbjct 435 GCGCAC-GGTAACGCGTCGCAGACGAACTCTCTTTCTATATCCACCGAGTCGGCGACGAT 377 Query 132843 TTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAAT-GCTTGAACATCAAGCAAGCAA 132901 | || | || | | || |||| | | | | || | | || | | |||||| || | Sbjct 376 TGCCTTCACTCTCTCCTCGCTTAGTTTATTC-CTAAGTAGGCTGTAGAGCAAGCACGCGA 318 Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961 | ||||| || ||||||||||| | || || | || || |||||| || || |||| Sbjct 317 AATCGCAGTGTAAGCCCTCGTCTCGCGAGATTAACTCATTTGAGAAAGTTAATCCCGGCA 258 Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021 |||| |||||||| || ||||| ||||| | | ||| || || || ||||| | ||| | Sbjct 257 TGAGACCGCGTTTCTTTAGCCAGAATATCGAGCAGAAGCTTCCGGAGAAGAAAATGCCTT 198 Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGC 133081 | ||| ||||| || | |||||| ||| | || || ||| || | ||||||| | Sbjct 197 CCACGCAGGCGAATGCGAGCAGGCGTTCGGCAAA---GGTTTCGGAGCCGTCGATCCATC 141 Query 133082 GCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGCGT 133132 | || ||||| | ||| |||||| | || || || || || ||||| |||| Sbjct 140 GGAGAGCCCACTGGGC--TTTCTTCGCCACACAGGGGATGGTATCGATTGCGT 90 >seq203223 Length=1923 Score = 141 bits (156), Expect = 9e-29 Identities = 356/533 (67%), Gaps = 11/533 (2%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || || || ||| | ||||| || || || || ||||||| ||| || || || Sbjct 615 TTCTGGTACTCCCCAACCCTCTTCTCGAAGAAGTTGGTCTTTCCCTGCAAAGAGATTAGT 556 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGC 132723 ||| | || || || || | |||||| ||| | || | || ||||| Sbjct 555 TCCATCCAGTCGAACGGATTCGAAACGTTGTACATCTTCCCGTAACCCAAGGCGCCGAGC 496 Query 132724 AGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA 132783 || | ||||| ||||| ||||||||||| ||| | | || | |||| ||| Sbjct 495 AGGCGATCGGCAACGAATTCGATGTATTGGCTCATTAGAGCACTGTTCATCCCCACTAGA 436 Query 132784 -CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT 132842 ||||| || | ||| ||| || || | || || | |||| ||||| |||||| Sbjct 435 GCGCAC-GGTAACGCGTCGCAGACGAACTCTCTTTCTATATCCACCGAGTCGGCGACGAT 377 Query 132843 TTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAAT-GCTTGAACATCAAGCAAGCAA 132901 | || | || | | || |||| | | | | || | | || | | ||||| || | Sbjct 376 TGCCTTCACTCTCTCCTCGCTTAGTTTATTC-CTAAGTAGGCTGTAGAGTAAGCACGCGA 318 Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961 ||||||| || ||||||||||| | || || | || || |||||| || || |||| Sbjct 317 AGTCGCAGTGTAAGCCCTCGTCTCGCGAGATTAACTCATTCGAGAAAGTTAATCCCGGCA 258 Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021 |||| |||||||| || ||||| ||||| | | ||| || || || ||||||| ||| | Sbjct 257 TGAGACCGCGTTTCTTTAGCCAGAATATCGAGCAGAAGCTTCCGGAGAAGAAGATGCCTT 198 Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGC 133081 | ||| ||||| || | |||||| ||| | || || ||| || | ||||||| | Sbjct 197 CCACGCAGGCGAATGCGAGCAGGCGTTCGGCAAA---GGTTTCGGAGCCGTCGATCCATC 141 Query 133082 GCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGCGT 133132 | || ||||| | ||| |||||| | || || || || || ||||| |||| Sbjct 140 GGAGAGCCCACTGGGC--TTTCTTCGCCACACAGGGGATGGTATCGATTGCGT 90 >seq73220 Length=12354 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || ||||| || ||| | || || ||| | Sbjct 7371 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATTACCCTTGAAGTTGAGAGTTCA 7312 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||||||| ||||| ||||| |||||| | ||||| Sbjct 7311 GACACCATCGATAATGTGAAAGCTAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 7252 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | ||||| ||||||||||| || | || || | ||||||||| Sbjct 7251 CAGAGGCTCATATTTGCGGGTAAACAGCTGGAAGATGGTCGGACATTGGCGGACTACAAC 7192 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| | || || || ||||| || ||||||||||| ||| Sbjct 7191 ATCCAGAAGGAGTCTACCCTTCACTTGGTTCTCCGTTTGAGAGGTGGC 7144 >seq173968 Length=7941 Score = 125 bits (138), Expect = 7e-24 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGC 133257 ||||| | ||| || ||||| || ||||| || || ||| || |||||| | ||||| Sbjct 7941 GAGTGGATGTTTTCAATGGCAATCTGAAATCCATAGAAGGCACGAGCCTCGGCGACCTGG 7882 Query 133258 ACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAA 133317 || || | ||| | || | || |||||| |||||| ||||| |||||||| Sbjct 7881 ACCTCCTTCATGAACCTTCCGGCGAGGTTTTCGAGGACGATTCCGTCAGAAGCGGCGAAG 7822 Query 133318 AAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGC 133377 ||||| || | || ||||||| || ||||| | | | | | ||||| | ||| Sbjct 7821 AAGGCAAGGATATGACTGATGAAGTGCTTCTCGTCGCTGGTGAGGTTTTCCCATTGACGC 7762 Query 133378 GTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 ||||| || ||||| || |||||| |||||||||||||||||||||| || |||||| Sbjct 7761 TGGTCCTGAGAGAGGTCGACTTCCTCGGCGGTCCAAAACGACGCCTCGGCCTTCTTGTAC 7702 Query 133438 AT 133439 || Sbjct 7701 AT 7700 >seq121659 Length=2328 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || || ||||||||| | || ||||| | || Sbjct 317 ATGCAGATTTTTGTGAAAACCCTTACCGGGAAGACCATCACCCTGGAGGTCGAAAGCTCC 258 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| || || ||||| ||||| | ||||| Sbjct 257 GACACCATTGACAACG-TGAAGGCTAAGATCCAGGATAAGGAGGGCATTCCACCAGACCA 199 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || |||||||| || | || |||||| ||||||||| Sbjct 198 GCAGAGGCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGCCGAACCCTCGCCGACTACAA 139 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| || | || ||||| |||||||| ||| Sbjct 138 CATTCAAAAAGAGTCAACTCTGCACTTGGTGCTCCGT 102 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || || || || || ||||| || | || ||||| | || Sbjct 545 ATGCAGATATTTGTGAAGACTCTTACAGGAAAGACCATTACTTTGGAAGTCGAAAGCTCC 486 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 485 GACACGATCGACAACG-TTAAAGCCAAGATCCAGGACAAGGAGGGTATTCCACCGGACCA 427 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| ||||| || || | ||| ||||| ||| ||||| Sbjct 426 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGAACCCTTGCCGATTACAA 367 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || || | || || || |||| || ||| Sbjct 366 CATCCAGAAAGAGTCAACTCTTCACCTGGTCCTCCGT 330 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 38235 TTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 38294 || ||| | ||||| || || || ||||| || || || || || || ||| | || || Sbjct 782 TTGAAACAGATGCAGATCTTTGTCAAAACCCTTACCGGAAAGACAATAACCCTAGAGGTT 723 Query 38295 GAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCC 38354 ||| | | |||| | | | | || | || |||| ||||||||||| || || Sbjct 722 GAGAGCTCGGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCA 663 Query 38355 GCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 38414 | || || ||| |||| || | ||| || || ||||| || |||| || || || | Sbjct 662 CCGGATCAGCAGAGGCTGATATTCGCCGGGAAGCAGCTTGAAGACGGTCGAACACTGGCC 603 Query 38415 GACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||||| ||||| | || |||| || ||||| ||| Sbjct 602 GACTACAACATCCAGAAGGAGTCCACCTTGCACTTAGTGCTTCGT 558 >seq127437 Length=6100 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || ||||| || |||||||||||| | || || ||| | Sbjct 2469 AATGCAAATCTTTGTTAAGACACTCACTGGAAAAACCATCACCCTTGAAGTAGAGAGTTC 2410 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || || | | || | |||||||| ||||| |||||||| ||| | |||| Sbjct 2409 TGACACGATTGACAATG-TAAAGGCAAAAATCCAAGACAAGGAGGGAATCCCCCCAGACC 2351 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| ||||||| | || || |||||||| || || | || ||| | || |||| Sbjct 2350 AGCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGGACCTTGGCAGATTACA 2291 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| || || || | || || |||||||| || || ||||||| || Sbjct 2290 ACATTCAGAAAGAGTCCACCCTTCATTTGGTTCTCCGGCTGAGAGGTGG 2242 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||||||||| || || || ||||| || || ||||||||| | || || ||| | | Sbjct 2697 AATGCAAATATTTGTTAAGACACTCACTGGAAAGACCATCACCCTTGAAGTTGAGAGCTC 2638 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | || || | | || | ||||||| ||||| || ||||| ||| | || | Sbjct 2637 TGATACGATTGACAATG-TAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGATC 2579 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | |||| || || || ||||| || || | | || | ||| || | Sbjct 2578 AGCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCCGATTATA 2519 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| || || || | || || || |||| || ||||||||||| || Sbjct 2518 ACATTCAGAAAGAGTCCACACTCCACCTGGTCCTCCGTTTGAGAGGTGG 2470 >seq142724 Length=6502 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || ||||| || ||||| ||| | || || ||| || Sbjct 3721 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTTGAGGTGGAGTCC 3662 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| ||||| || || ||||| | ||| Sbjct 3661 TCTGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGAC 3602 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || || ||||| | ||| || || ||||| || |||| || ||||| |||||| Sbjct 3601 CAGCAACGCCTCATATTCGCCGGGAAGCAGCTCGAGGACGGCCGGACCCTAGCTGACTAC 3542 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||| ||||| | || || || ||||||| || | ||||| ||| Sbjct 3541 AACATCCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGCCTCAGAGGTGGC 3491 >seq76175 Length=8586 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || ||||| || ||||| ||| | || || || | Sbjct 2254 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCG 2313 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| ||||| || || || || | ||| Sbjct 2314 TCTGACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGAC 2373 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| || ||||||||||| |||| || ||||| ||||||| Sbjct 2374 CAGCAGCGTCTTATCTTCGCTGGAAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTAC 2433 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| |||| || || ||||||| || Sbjct 2434 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCG 2471 >seq2835 Length=4848 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || ||||| || ||||| || ||||| ||| | || || || | Sbjct 581 AAGATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCA 640 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| ||||| || || || || | ||| Sbjct 641 TCTGACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGAC 700 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| ||||| | ||| || ||||||||||| |||| || ||||| ||||||| Sbjct 701 CAGCAGCGTCTCATCTTCGCTGGAAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTAC 760 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| |||| || || ||||||| || Sbjct 761 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCG 798 >seq138849 Length=4585 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || || || ||| | || || || | Sbjct 1228 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCA 1287 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359 | |||| | | | | || | || |||| ||||| || || || ||||||| | Sbjct 1288 TCTGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCAT-CCCGCCGGA 1346 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | ||| |||||||||||||| |||| || ||||| |||||| Sbjct 1347 CCAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTA 1406 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| ||||| ||||| | || || || ||||||| || Sbjct 1407 CAATATCCAGAAGGAGTCAACCCTCCACCTGGTGCTTCG 1445 >seq56209 Length=7549 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || || || ||| | || || || | Sbjct 2745 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCA 2804 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359 | |||| | | | | || | || |||| ||||| || || || ||||||| | Sbjct 2805 TCTGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCAT-CCCGCCGGA 2863 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | ||| |||||||||||||| |||| || ||||| |||||| Sbjct 2864 CCAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTA 2923 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| ||||| ||||| | || || || ||||||| || Sbjct 2924 CAATATCCAGAAGGAGTCAACCCTCCACCTGGTGCTCCG 2962 >seq45179 Length=1454 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 38235 TTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 38294 || ||| | ||||| || || || ||||| || || || || ||||| ||| | || || Sbjct 1249 TTGAAACAGATGCAGATCTTTGTTAAAACTCTTACCGGAAAGACCATAACCCTAGAGGTT 1190 Query 38295 GAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCC 38354 ||| | |||||| | | | | || | || |||| ||||||||||| || || Sbjct 1189 GAGAGCTCCGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCA 1130 Query 38355 GCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 38414 | || || ||| |||| || | ||| || |||||||| || |||| || || || | Sbjct 1129 CCGGATCAGCAGAGGCTGATATTCGCCGGGAAACAGCTTGAAGACGGTCGAACACTGGCC 1070 Query 38415 GACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||||| ||||| | || |||| || ||||| ||| Sbjct 1069 GACTACAACATCCAGAAGGAGTCCACCTTGCACTTAGTGCTTCGT 1025 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || |||||||| | || || ||| || Sbjct 328 ATGCAAATCTTCGTGAAGACTCTGACTGGGAAGACCATCACGCTGGAGGTGGAGAGTTCC 269 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||| || | ||||| || || || || | || || Sbjct 268 GACACCATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAAGGGATCCCACCGGATCAG 209 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | ||| || || |||||||| || | | | ||||| ||||||||| Sbjct 208 CAGAGGTTGATCTTCGCTGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAAC 149 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || ||| | || || || Sbjct 148 ATCCAGAAGGAGTCCACCCTCCATCTTGTCCTCCG 114 >seq9834 Length=2319 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || |||||||| | || || ||| || Sbjct 283 ATGCAAATCTTCGTGAAGACACTGACTGGAAAGACCATCACGCTGGAGGTGGAGAGTTCC 342 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| ||| || | ||||| ||||| || || | || || Sbjct 343 GACACCATTGATAATGTCAAAGCAAAGATTCAGGACAAGGAGGGGATCCCACCGGATCAG 402 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | ||| || || |||||||| || | | | ||||| ||||||||| Sbjct 403 CAGAGGCTGATCTTCGCCGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAAC 462 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| |||| || ||| | || || || Sbjct 463 ATCCAGAAGGAGTCGACCCTCCATCTTGTCCTCCG 497 >seq83787 Length=2295 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 38235 TTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 38294 || ||| | ||||| || || || ||||| || || || || || || ||| | || || Sbjct 1671 TTGAAACAGATGCAGATCTTTGTGAAAACCCTTACCGGAAAGACAATAACCCTAGAGGTT 1730 Query 38295 GAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCC 38354 ||| | | |||| | | | | || | || |||| ||||||||||| || || Sbjct 1731 GAGAGCTCGGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCA 1790 Query 38355 GCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 38414 | || || ||| |||| || | ||| || || ||||| || |||| || || || | Sbjct 1791 CCGGATCAGCAGAGGCTGATATTCGCCGGGAAGCAGCTTGAAGACGGTCGAACTCTGGCC 1850 Query 38415 GACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||||| ||||| | || |||| || ||||| ||| Sbjct 1851 GACTACAACATCCAGAAGGAGTCCACCTTGCACTTAGTGCTTCGT 1895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498857070440960