Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq203261 86.0 7e-12 >seq203261 Length=8816 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 9/140 (6%) Strand=Plus/Minus Query 162969 TCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCT 163028 ||| || || |||||||| || |||| |||| | |||||| |||||||||||| Sbjct 1355 TCTAGGAATATCTGGTACCTTCAACTTCATGATTGTGTTC--------GCACAACATCCT 1304 Query 163029 AATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGC 163088 |||||| | ||||||||| | | | | |||||||| ||||| || || |||| Sbjct 1303 TATGCACTCATTCCATATGTTAGACATAATTGTTGTATTCGACGGTTCCCTATTCAGTGT 1244 Query 163089 TATGCACGGTTCTCTTGTTA 163108 |||||||||||| |||| || Sbjct 1243 TATGCACGGTTC-CTTGATA 1225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551629882779360