Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq200826 107 5e-18 >seq200826 Length=6052 Score = 107 bits (118), Expect = 5e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 305307 GACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGT 305366 |||| || ||||| |||| ||||| |||||||| || ||| ||||| ||||||| Sbjct 4307 GACACTTAAATGATGGGGATTTTGTTCTCTTCAATAGACAGCCAAGTCTGCACAAAATGT 4248 Query 305367 CTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTG 305426 |||| |||| |||| | |||| || | | | || || || || ||| | || Sbjct 4247 CTATTATGGGGCATAGAATCAAGATAATGCCATACTCAACCTTCCGGTTGAATTTGTCTG 4188 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | | || |||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct 4187 TTACATCCCCATATAATGCAGATTTTGATGGAGATGAAATGAATATGCATGTTCCTCAGT 4128 Query 305487 CA 305488 || Sbjct 4127 CA 4126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183612780328684