Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq121659 84.2 2e-11
seq73220 84.2 2e-11
>seq121659
Length=2328
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | |||||||||||||||||||||||||| | ||| || ||||||
Sbjct 109 ACCAAGTGCAGAGTTGACTCTTTTTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCTTCC 168
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||||| ||||| | |||| || | ||| || ||||| || ||||| || |||||
Sbjct 169 AGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATC 224
>seq73220
Length=12354
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || |||||||||||| || || || ||| || |||||||| || | |
Sbjct 6722 GATTCTTTCTGTATGTTGTAGTCGGCCAAAGTGCGGCCATCCTCAAGCTGTTTTCCAGCA 6781
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | |||||| || ||||| |||||||| || || ||||||| || |
Sbjct 6782 AAGATCAGCCTCTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATTTTTGCCTTGACA 6841
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||| ||||| | || | ||||||||||| | || ||
Sbjct 6842 TTGTCAATTGTGTCTGAGCTCTCAACTTCAAGAGTGATTGTTTTACCAGTTAAGGTCTTC 6901
Query 132110 ATGAAAATCTGCAT 132123
| |||||||||||
Sbjct 6902 ACAAAAATCTGCAT 6915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475357450407840
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |