Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq76562 82.4 6e-11 >seq76562 Length=2025 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 ||||| |||||| | || |||||| || || | |||| ||| ||||||||||| ||| Sbjct 1802 GACAAGGAAGGCATTCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAATTGGAA 1743 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | ||| | | ||||| ||||| |||||||| || ||||| || | || ||| Sbjct 1742 GATGGTCGCACTCTTGCAGATTATAACATCCAAAAAGAGTCCACACTTCACCTTGTTTTG 1683 Query 106473 AGGTTACGAGGAGGA 106487 ||| | | |||||| Sbjct 1682 AGGCTCAGGGGAGGA 1668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401297710573952