Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1
_202015-09-10] 210,444 sequences; 539,624,286 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq161624 93.3 5e-14
>seq161624
Length=13970
Score = 93.3 bits (102), Expect = 5e-14
Identities = 145/206 (70%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 176455 TGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 176514
||||||||||| | | || | ||||| |||||||| ||||||||| || | |
Sbjct 9743 TGGGAACTTAGATTTTGTCTGGATATGCGCCCTTGGATTGTTGTTGCATATTCAACTCTT 9802
Query 176515 GTATCTGCAG---CGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCT 176571
|| || || | | | |||||| | || | | | |||||||| | || |||
Sbjct 9803 GT---TGTAGTTACTACTGTTGTTTTCTTGATCAACCTAATCGGTCAATAAAACTTTTCT 9859
Query 176572 GATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAG 176631
|| |||||||||| || ||| | ||| |||||||| || |||||||||| || |||
Sbjct 9860 AATTGTATGCCTCTAGGACTTTTTGATACTTTCAACTTCATAATTGTATTCCAGGCTGAG 9919
Query 176632 CACAACATTCTAATGCACCCATTCCA 176657
||| ||| || ||||||||||||||
Sbjct 9920 TACATCATCCTTATGCACCCATTCCA 9945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 601906877806080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |