Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq161624 93.3 5e-14 >seq161624 Length=13970 Score = 93.3 bits (102), Expect = 5e-14 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 176455 TGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 176514 ||||||||||| | | || | ||||| |||||||| ||||||||| || | | Sbjct 9743 TGGGAACTTAGATTTTGTCTGGATATGCGCCCTTGGATTGTTGTTGCATATTCAACTCTT 9802 Query 176515 GTATCTGCAG---CGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCT 176571 || || || | | | |||||| | || | | | |||||||| | || ||| Sbjct 9803 GT---TGTAGTTACTACTGTTGTTTTCTTGATCAACCTAATCGGTCAATAAAACTTTTCT 9859 Query 176572 GATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAG 176631 || |||||||||| || ||| | ||| |||||||| || |||||||||| || ||| Sbjct 9860 AATTGTATGCCTCTAGGACTTTTTGATACTTTCAACTTCATAATTGTATTCCAGGCTGAG 9919 Query 176632 CACAACATTCTAATGCACCCATTCCA 176657 ||| ||| || |||||||||||||| Sbjct 9920 TACATCATCCTTATGCACCCATTCCA 9945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601906877806080