Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20cinerea_20x_20Vitis_20riparia_20[genbank_20GCA_5F001282645.1 _202015-09-10] 210,444 sequences; 539,624,286 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq73220 120 2e-22 seq127437 111 1e-19 seq138849 104 2e-17 seq56209 104 2e-17 seq9834 104 2e-17 seq76562 100 2e-16 seq207794 96.9 2e-15 seq44755 91.5 1e-13 seq121659 84.2 1e-11 seq84576 84.2 1e-11 seq83787 84.2 1e-11 seq45179 82.4 5e-11 >seq73220 Length=12354 Score = 120 bits (132), Expect = 2e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || || ||||| |||||||| |||||||| | | Sbjct 6915 ATGCAGATTTTTGTGAAGACCTTAACTGGTAAAACAATCACTCTTGAAGTTGAGAGCTCA 6856 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || |||||| || ||||| ||||| | || || || || Sbjct 6855 GACACAATTGACAATGTCAAGGCAAAAA-TTCAGGACAAGGAAGGCATTCCTCCTGACCA 6797 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| || ||||| || || || | |||||||| | ||| ||||| Sbjct 6796 ACAGAGGCTGATCTTTGCTGGAAAACAGCTTGAGGATGGCCGCACTTTGGCCGACTACAA 6737 Query 23790 CATACAAAAAGAGTCCAC 23807 |||||| ||||| || || Sbjct 6736 CATACAGAAAGAATCTAC 6719 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || |||||||| |||||||| ||||| || |||||||| | | Sbjct 7599 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACCCTTGAAGTTGAGAGCTCA 7540 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | ||||| || ||| | || ||||| || Sbjct 7539 GACACCATTGATAATGTCAAAGCGAAAA-TCCAGGACAAGGAGGGTATTCCCCCAGACCA 7481 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | |||||||| || || || || || || | || || || | ||||| || Sbjct 7480 GCAGAGGCTTATATTTGCTGGTAAGCAGCTCGAGGATGGCCGGACATTGGCTGATTATAA 7421 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || ||||||||||| | || || ||| Sbjct 7420 CATCCAGAAAGAGTCCACCCTTCACTTGGTT 7390 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| ||||| || |||||||| || ||||| |||||||| | Sbjct 8055 ATGCAGATCTTTGTTAAGACCCTTACTGGAAAAACCATAACTCTTGAAGTTGAGAGTTCT 7996 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| |||| |||||| | ||||| || ||| | || || || || Sbjct 7995 GATACCATTGACAATGTTAAGGCAAAAA-TCCAAGACAAGGAGGGTATCCCCCCTGACCA 7937 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| || || || || || || | | ||||| | |||||| || Sbjct 7936 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGTAGGACTTTGGCCGATTATAA 7877 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| |||||||||||||| |||| | || | | ||| |||||||| Sbjct 7876 CATTCAAAAAGAGTCCACCCTACACCTTGTACTTCGTTTGAGAGGAGGA 7828 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || ||||||||||| || || || || | | Sbjct 6687 ATGCAGATTTTTGTGAAGACCCTGACAGGTAAAACGATCACACTTGAGGTGGAGAGCTCT 6628 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | ||| ||| ||||| || ||| | || |||||||| Sbjct 6627 GACACCATAGATAATGTGAAGGC-AAAGATTCAAGACAAGGAGGGTATCCCTCCAGATCA 6569 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | |||||||| || || || || || || | || || || | |||||||| Sbjct 6568 GCAGAGGCTCATATTTGCTGGAAAGCAGCTAGAGGATGGGCGGACCTTGGCAGATTACAA 6509 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || || || ||| | ||| | ||| Sbjct 6508 TATTCAGAAGGAATCTACACTTCATCTTGTT 6478 >seq127437 Length=6100 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| || ||||| |||||||| ||||| || ||||| || | Sbjct 2469 AATGCAAATCTTTGTTAAGACACTCACTGGAAAAACCATCACCCTTGAAGTAGAGAGTTC 2410 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| | |||| |||||| ||||| || || | || ||||| || Sbjct 2409 TGACACGATTGACAATGTAAAGGCAAAAATCCAAGACAAGGAGGGAATCCCCCCAGACCA 2350 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || ||||| || || || | || || || | |||||||| Sbjct 2349 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGGACCTTGGCAGATTACAA 2290 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || ||||||||||| | ||||| ||| | || || |||| ||| Sbjct 2289 CATTCAGAAAGAGTCCACCCTTCATTTGGTTCTCCGGCTGAGAGGTGGA 2241 Score = 98.7 bits (108), Expect = 7e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| || ||||| ||||| || ||||| || |||||||| | | Sbjct 2697 AATGCAAATATTTGTTAAGACACTCACTGGAAAGACCATCACCCTTGAAGTTGAGAGCTC 2638 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| | |||| ||||| ||||| ||||| | || || ||||| Sbjct 2637 TGATACGATTGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGATCA 2578 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| || || || || || || | | ||||| | |||||| || Sbjct 2577 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCCGATTATAA 2518 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || |||||||||||| Sbjct 2517 CATTCAGAAAGAGTCCACA 2499 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| |||||||| |||||||| || || || || | | Sbjct 2012 ATGCAGATATTTGTGAAGACCCTGACGGGAAAGACGATCACACTAGAGGTGGAGAGCTCA 1953 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | |||| || ||||| || || | || |||||||| Sbjct 1952 GACACCATAGATAATGTGAAGGCCAAAA-TTCAGGACAAGGAGGGGATCCCTCCAGATCA 1894 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || |||| || | || || | | |||||||| Sbjct 1893 GCAGAGGCTGATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACACTTGCTGATTACAA 1834 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 1833 CATTCAGAAGGAGTCCAC 1816 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| ||||| || || || || || || || ||||| || | Sbjct 2924 ATGCAGATCTTTGTTAAGACCCTTACTGGGAAGACTATAACCCTTGAAGTGGAAAGTTCT 2865 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| |||| | |||| | ||||| || ||| | || || || || Sbjct 2864 GATACCATTGACAATGTTAAGGCGAAAA-TCCAAGACAAGGAGGGTATCCCCCCTGACCA 2806 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| || || || || || || | | ||||| | |||||| || Sbjct 2805 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCCGATTATAA 2746 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || |||||||||||| Sbjct 2745 CATTCAGAAAGAGTCCACA 2727 >seq138849 Length=4585 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||| ||||| || ||||| || || || ||||| || Sbjct 1228 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCA 1287 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || || ||||| ||||| | ||||| || Sbjct 1288 TCTGACACGATCGATAATGTCAAGGC-CAAGATCCAAGACAAGGAAGGCATCCCGCCGGA 1346 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || || |||||||| ||||| |||| || || ||| ||| || Sbjct 1347 CCAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTA 1406 Query 23787 CAACATACAAAAAGAGTCCAC 23807 ||| || || || ||||| || Sbjct 1407 CAATATCCAGAAGGAGTCAAC 1427 >seq56209 Length=7549 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||| ||||| || ||||| || || || ||||| || Sbjct 2745 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCA 2804 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || || ||||| ||||| | ||||| || Sbjct 2805 TCTGACACGATCGATAATGTCAAGGC-CAAGATCCAAGACAAGGAAGGCATCCCGCCGGA 2863 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || || |||||||| ||||| |||| || || ||| ||| || Sbjct 2864 CCAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTA 2923 Query 23787 CAACATACAAAAAGAGTCCAC 23807 ||| || || || ||||| || Sbjct 2924 CAATATCCAGAAGGAGTCAAC 2944 >seq9834 Length=2319 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||||||||| ||||| || ||||| || || || || | | Sbjct 55 ATGCAGATTTTTGTGAAAACCCTCACCGGAAAGACCATCACCCTGGAGGTCGAAAGCTCC 114 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || ||| ||||| ||||| | || ||||| || Sbjct 115 GACACCATTGACAACGTGAAAGCGAAGATTCAGGACAAGGAAGGGATTCCACCAGACCAG 174 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || |||||||| || || || || | || ||| | | ||||||||| Sbjct 175 CAGAGACTGATTTTCGCCGGCAAGCAGCTTGAGGATGGGCGAACTCTTGCTGATTACAAC 234 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 235 ATTCAGAAGGAGTCCAC 251 >seq76562 Length=2025 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||| ||||| | || || ||||| ||| | || || ||||| ||||||||| ||||| Sbjct 1802 GACAAGGAAGGCATTCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAATTGGAA 1743 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | |||||| | | ||||| ||||| ||||||||||||||| | || | ||||| Sbjct 1742 GATGGTCGCACTCTTGCAGATTATAACATCCAAAAAGAGTCCACACTTCACCTTGTTTTG 1683 Query 23824 AGGTTGCGAGGAGGA 23838 ||| | | |||||| Sbjct 1682 AGGCTCAGGGGAGGA 1668 >seq207794 Length=1432 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || || ||||| |||||||| ||||| || || || || || | | Sbjct 888 AATGCAGATATTTGTGAAGACCCTGACGGGAAAGACGATTACACTAGAGGTGGAGAGCTC 829 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | || |||||| || ||||| ||||| | || ||||||| Sbjct 828 AGACACCATAGATAATGTGAAGGCAAAAA-TTCAGGACAAGGAAGGGATCCCTCCAGATC 770 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || || || |||| || | || ||| | | ||||||| Sbjct 769 AGCAGAGGCTCATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACTCTTGCTGATTACA 710 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| || || ||||| || | || || ||| Sbjct 709 ACATTCAGAAGGAGTCTACTCTTCACTTGGTT 678 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || || || || || ||||| || |||||||| ||||| || | | Sbjct 1116 AATGCAAATATTTGTGAAGACACTGACCGGAAAGACCATCACTCTTGAAGTGGAGAGCTC 1057 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | || |||| | | ||||| || ||| | || || |||| Sbjct 1056 TGACACAATCGACAATGTGAAGGCAAAGA-TCCAGGACAAGGAGGGTATCCCCCCCGATC 998 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || ||||| || || || | | | ||| | | ||||||| Sbjct 997 AGCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACA 938 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| ||||| || ||||| Sbjct 937 ACATTCAAAAGGAATCCAC 919 >seq44755 Length=3421 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || || || || || ||||| || |||||||| ||||| || | | Sbjct 2284 AATGCAAATATTTGTGAAGACACTGACTGGAAAGACCATCACTCTTGAAGTGGAGAGCTC 2225 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | || |||| | | ||||| || ||| | || ||||||| Sbjct 2224 TGACACAATCGACAATGTGAAGGCAAAGA-TCCAAGACAAGGAGGGTATCCCCCCAGATC 2166 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || ||||| || || || | | | ||| | | ||||||| Sbjct 2165 AGCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACA 2106 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| ||||| || ||||| | || ||||| Sbjct 2105 ACATTCAAAAGGAATCCACTCTTCACCTAGTT 2074 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || ||||| ||||| || || || || || | | Sbjct 2055 ATGCAGATATTTGTGAAGACCCTGACAGGAAAGACGATTACACTAGAGGTGGAGAGCTCA 1996 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || |||||| || ||||| ||||| | || |||||||| Sbjct 1995 GACACCATAGATAATGTGAAGGCAAAAA-TTCAGGACAAGGAAGGGATCCCTCCAGATCA 1937 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || |||| || | || ||| | | |||||||| Sbjct 1936 GCAGAGGCTCATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACTCTTGCTGATTACAA 1877 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 1876 CATTCAGAAGGAGTCTACTCTTCACTTGGTT 1846 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||||||||| || || || || || || || ||||| || | Sbjct 2967 ATGCAGATCTTTGTTAAAACCCTTACTGGGAAGACTATAACCCTTGAAGTGGAAAGTTCT 2908 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| |||| | |||| | ||||| |||||| | || || || || Sbjct 2907 GATACCATTGACAATGTTAAGGCGAAAA-TCCAAGACAAGGAAGGTATCCCCCCTGACCA 2849 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| || || || || || || | | ||||| | ||||| || Sbjct 2848 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCAGATTATAA 2789 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || |||||||||||| Sbjct 2788 CATTCAGAAAGAGTCCACA 2770 >seq121659 Length=2328 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || ||||| || || ||| | ||||| || | | Sbjct 545 ATGCAGATATTTGTGAAGACTCTTACAGGAAAGACCATTACTTTGGAAGTCGAAAGCTCC 486 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | ||||| || ||| | || || || || Sbjct 485 GACACGATCGACAACGTTAAAGCCAAGA-TCCAGGACAAGGAGGGTATTCCACCGGACCA 427 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | || || | | ||||||||| Sbjct 426 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGAACCCTTGCCGATTACAA 367 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 366 CATCCAGAAAGAGTCAAC 349 >seq84576 Length=1122 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || ||||| |||||||| || || || || | | Sbjct 1011 ATGCAGATATTTGTGAAGACCCTGACAGGAAAGACGATCACACTAGAGGTGGAGAGCTCA 952 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | |||| || ||||| || || | || |||||||| Sbjct 951 GACACCATAGATAATGTGAAGGCCAAAA-TTCAGGACAAGGAGGGGATCCCTCCAGATCA 893 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || |||| || | || || | | |||||||| Sbjct 892 GCAGAGGCTGATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACACTTGCTGATTACAA 833 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 832 CATTCAGAAGGAGTCCAC 815 >seq83787 Length=2295 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || ||||| || || ||| | ||||| || | | Sbjct 1908 ATGCAGATATTTGTGAAAACTCTTACAGGAAAGACCATTACTTTGGAAGTCGAAAGCTCC 1967 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | ||||| || ||| | || || || || Sbjct 1968 GACACGATCGACAACGTTAAAGCCAAGA-TCCAGGACAAGGAGGGTATTCCACCGGACCA 2026 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | || || | | ||||||||| Sbjct 2027 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGAACCCTTGCCGATTACAA 2086 Query 23790 CATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 2087 TATCCAGAAAGAGTCAAC 2104 >seq45179 Length=1454 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| |||||||| || || ||||| || || ||||| || || || | | Sbjct 557 AATGCAGATTTTTGTTAAAACTCTGACCGGAAAGACAATTACTCTAGAGGTCGAAAGCTC 498 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | ||| || || || || || || | || || || || Sbjct 497 CGACACCATCGACAACGTGAAAGCTAAGATCCAGGATAAGGAGGGCATTCCACCGGACCA 438 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || || || |||||||||| || ||| | | |||||||| Sbjct 437 GCAGAGGCTGATTTTCGCAGGTAAGCAGCTGGAAGACGGCCGAACTCTCGCGGATTACAA 378 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 377 CATTCAGAAAGAGTCAAC 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337142677625552