Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq42 93.3 4e-14 >seq42 Length=30274277 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||||||||| | || || |||| || || ||||| || ||| ||| | | Sbjct 11327181 AATGCAAATATTTGTAAAGACGCTGACCGGGAAGACCATCACTCTTGAAGTGGAGAGCTC 11327122 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | || | ||| ||| || || || || ||| | ||| |||||| Sbjct 11327121 TGATACAATCGACAATGTGAAGGCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGATCA 11327062 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || || || |||||||| || ||||| || || ||| | ||| |||| |||||||| Sbjct 11327061 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACAA 11327002 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||||| |||||||| || |||||| |||| | || | || |||||| Sbjct 11327001 CATTCAAAAGGAATCCACCCTTCACCTGGTTCTTCGCCTTCGTGGAGGG 11326953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428326044802085