Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07]
1,907 sequences; 486,196,837 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq42 255 6e-63
seq23 147 2e-30
seq49 140 3e-28
seq57 136 4e-27
seq12 131 2e-25
>seq42
Length=30274277
Score = 255 bits (282), Expect = 6e-63
Identities = 520/764 (68%), Gaps = 9/764 (1%)
Strand=Plus/Minus
Query 116603 CGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAG 116662
|||||| || ||||| || || ||||| || | ||| |||||||| |||||||||
Sbjct 25647527 CGGTTCTGTATGTTCCCGATTCAGTACCCTGAAGTCTGGGAAATGTACAAGAAGGCCGAG 25647468
Query 116663 GCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGC 116722
|||||||| ||||| | |||||| || ||||| || ||||| | | | ||||| |
Sbjct 25647467 GCGTCGTTTTGGACAGCCGAGGAAGTCGACCTCTCTCAGGACCAGCGTCAATGGGAAAAC 25647408
Query 116723 TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGAC 116782
| | | | ||||| || ||||||| || | || ||||| |||||||| |||
Sbjct 25647407 CTCACCAGCGACGAGAAGCACTTCATCAGTCATATCCTTGCCTTCTTCGCCGCTTCTGAC 25647348
Query 116783 GGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCG 116842
|| |||||| ||| || || | || | ||| ||||||| ||||| ||||||||
Sbjct 25647347 GGAATCGTCCTCGAAAACCTCGCCGGAAGGTTCATGAAGGAGGTCCAGGTCGCCGAGGCT 25647288
Query 116843 CGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACC 116902
|| |||||| || |||||||| ||||| || ||| | ||||| || |||||
Sbjct 25647287 CGTGCCTTCTATGGATTTCAGATTGCCATTGAAAACATCCACTCCGAGATGTACAGTCTG 25647228
Query 116903 CTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAG 116962
| | || |||| | | | ||||||| | | | || |||| |||||
Sbjct 25647227 TTGTTAGAATCGTATATCAAGGATCCAAAGGAGAAAAACAGGCTCTTTCACGCAATCGAT 25647168
Query 116963 ACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG 117022
|| || || || || |||| ||| ||||||| || || ||||||| |||| ||
Sbjct 25647167 ACCATCCCCTGTGTAGCGAAGAAAGCCCAGTGGGCTCTCCGATGGATCGACGGCTCCGA- 25647109
Query 117023 GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGC 117082
|||| | ||| |||||| | || ||||| ||| || ||| ||||||| || ||
Sbjct 25647108 --AACCTTTGCCGAACGCCTGCTCGCATTCGCCTGCGTGGAAGGCATCTTCTTCTCCGGA 25647051
Query 117083 AGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGC 117142
|| ||| | | ||||| ||||| ||||||||||| |||||||| || | ||||||
Sbjct 25647050 AGCTTCTGCTCGATATTCTGGCTAAAGAAACGCGGTCTCATGCCGGGATTAACTTTCTCA 25646991
Query 117143 AACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAG 117202
|| ||| | ||||| | |||||||| | || |||||||| || || ||||| | ||
Sbjct 25646990 AATGAGTTAATCTCGCGAGACGAGGGCTTACACTGCGACTTCGCGTGCTTGCTCTACAGC 25646931
Query 117203 C-ATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGC 117261
| | || | | | || ||||| || | | || | || |||||| ||||| |||| |
Sbjct 25646930 CTACTTAG-GAATAAACTGAGCGAGGAGAGAGTGAAGGCAATCGTCGCCGACTCGGTGGA 25646872
Query 117262 CATCGAGCAGCG-CTTCCTCACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGC 117319
|| || || | ||| || ||| ||| |||| ||||| ||| |||| | || |
Sbjct 25646871 TATAGA-AAGAGAGTTCGTCTGCGACGCGTTGCC-GTGCGCTCTAGTGGGGATGAACAGT 25646814
Query 117320 GAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCT 117363
| ||| ||||||||||| ||||| ||||| | |||||
Sbjct 25646813 GCTCTAATGAGCCAATACATCGAATTCGTTGCCGATCGCCTGCT 25646770
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || ||||| || |||||||||||| | || || || |
Sbjct 11519832 AATGCAAATCTTTGTTAAGACACTCACTGGAAAAACCATCACCCTTGAAGTAGAGAGTTC 11519891
Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | || || | | |||| |||||| | ||||| ||||| |||||| | ||||
Sbjct 11519892 TGACACGATTGACAATG-TAAAGGCAAAAATCCAAGACAAGGAGGGAATCCCCCCAGACC 11519950
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| | ||||||| || || |||||||| || || | || ||| | || ||||
Sbjct 11519951 AGCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGGACCTTGGCAGATTACA 11520010
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||| ||||| ||| |||| || ||| | || | || |||| || ||
Sbjct 11520011 ACATTCAGAAAGAGTCCACCCTTCATTTGGTTCTCCGGCTGAGAGGTGG 11520059
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || ||||| || |||||||||||| | || || || |
Sbjct 11327409 AATGCAAATCTTTGTTAAGACACTCACTGGAAAAACCATCACCCTTGAAGTAGAGAGTTC 11327350
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | | |||| ||||| | ||||| ||||| |||||| | |||||
Sbjct 11327349 TGACACAATTGACAATGTAAAGGCGAAAATCCAAGACAAGGAGGGAATCCCCCCAGACCA 11327290
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| || || |||||||| || || | || ||| | || |||||
Sbjct 11327289 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGGACCTTGGCAGATTACAA 11327230
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| ||||| ||| |||| || ||||| || | || |||| || ||
Sbjct 11327229 CATTCAGAAAGAGTCCACCCTTCATCTGGTTCTCCGGCTGAGAGGTGG 11327182
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || ||||| || ||||| || ||| | || || || |
Sbjct 11334522 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATTACCCTTGAAGTTGAGAGTTCA 11334463
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | || | ||||| | ||||| ||||| || ||| | ||||||
Sbjct 11334462 GACACCATCGATAATGTGAAAGCTAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 11334403
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||||| | || || ||||||||||| || | || || | |||||||||
Sbjct 11334402 CAGAGGCTCATATTTGCTGGTAAACAGCTGGAAGATGGTCGGACATTGGCGGACTACAAC 11334343
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| | || || || | || | || ||||| || |||
Sbjct 11334342 ATCCAGAAGGAGTCTACCCTTCACTTGGTTCTCCGTTTGAGAGGTGGC 11334295
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || ||||| || ||||| ||||| | || || || |
Sbjct 11481851 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACACTTGAAGTTGAGAGTTCA 11481910
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | ||| ||||| | | ||||| ||||| |||||| | |||||
Sbjct 11481911 GACACCATTGATAACGTTAAAGCAAAAA-TCCAGGACAAGGAGGGTATCCCCCCAGACCA 11481969
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||| | || || || ||||| || || | || || | ||| |||||
Sbjct 11481970 GCAGAGGCTCATATTTGCTGGTAAGCAGCTCGAAGATGGTCGGACATTGGCCGATTACAA 11482029
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| | || || || | || | || ||||| || |||
Sbjct 11482030 CATCCAGAAGGAATCAACCCTTCACTTGGTTCTCCGTTTGAGAGGTGGC 11482078
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||||||||| ||||| ||||| || || || |||||||| | || || || | |
Sbjct 11327181 AATGCAAATATTTGTAAAGACGCTGACCGGGAAGACCATCACTCTTGAAGTGGAGAGCTC 11327122
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | | |||| ||| || | ||||| ||||| |||||| | || ||
Sbjct 11327121 TGATACAATCGACAATGTGAAGGCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGATCA 11327062
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| || || |||||||| || || | | || || || |||||
Sbjct 11327061 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACAA 11327002
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| || ||||| |||| || || || ||
Sbjct 11327001 CATTCAAAAGGAATCCACCCTTCACCTGGT 11326972
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||||||||| ||||| ||||| || || || |||||||| | || || || | |
Sbjct 11520060 AATGCAAATATTTGTAAAGACGCTGACCGGGAAGACCATCACTCTTGAGGTGGAGAGCTC 11520119
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | | |||| || || | ||||| ||||| |||||| | || ||
Sbjct 11520120 TGACACAATCGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGTATCCCCCCAGATCA 11520179
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| || || |||||||| || || | | || || || |||||
Sbjct 11520180 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACAA 11520239
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| || ||||| |||| || || || ||
Sbjct 11520240 CATACAAAAGGAATCCACCCTTCACCTGGT 11520269
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || ||||| ||||| | || || || | |
Sbjct 11482535 ATGCAGATTTTTGTGAAGACCCTGACAGGTAAAACGATCACACTAGAGGTGGAGAGCTCT 11482594
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | |||| ||| |||| ||||| ||||||||||| | || |||
Sbjct 11482595 GACACCATAGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATCCCTCCAGATCAG 11482654
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | ||||||| || || || ||||| || || | ||| ||| | || |||||
Sbjct 11482655 CAGAGGCTCATCTTTGCTGGAAAGCAGCTAGAGGATGGGCGGACCTTGGTAGATTACAAT 11482714
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| |||||||| | || || ||||| ||
Sbjct 11482715 ATTCAGAAGGAATCTACACTTCATCTTGT 11482743
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || ||||| || ||||| |||||| | || || || | |
Sbjct 11334750 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACCCTTGAAGTTGAGAGCTCA 11334691
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| | ||||| | ||||| ||||| || ||| | ||||||
Sbjct 11334690 GACACCATTGATAATGTCAAAGCGAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 11334631
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || || | || || || ||||| || || | || || | || || |||
Sbjct 11334630 CAGAGGCTTATATTTGCTGGTAAGCAGCTCGAGGATGGCCGGACATTGGCTGATTATAAC 11334571
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||| ||| |||| || || | || | || || || ||||||
Sbjct 11334570 ATCCAGAAAGAGTCCACCCTTCACTTGGTTCTCCGTTTAAGAGGCGGC 11334523
Score = 82.4 bits (90), Expect = 8e-11
Identities = 145/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA-AGC-C 40746
|||||||||||| || ||||| || || || || |||||||| | || || || || |
Sbjct 11334979 AATGCAAATATTTGTCAAAACACTAACTGGAAAGACCATCACACTTGAAGTTGAGAGTTC 11334920
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| ||| || |||| | |||| ||| || | ||||| ||||| || || | |||
Sbjct 11334919 AGATACAAT-TGACAACG-TGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCAGAC 11334862
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | || |||| || || || |||||||| || | || || | || ||
Sbjct 11334861 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGGACATTGGCTGATTAT 11334802
Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||||| |||| || ||
Sbjct 11334801 AACATCCAGAAGGAGTCCACCCTTCA 11334776
Score = 82.4 bits (90), Expect = 8e-11
Identities = 160/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA-AGC-C 40746
|||||||||||| || |||||||| || | || || ||||| | || || || || |
Sbjct 11481394 AATGCAAATATTTGTCAAAACGCTTACTAGAAAGACAATCACACTTGAAGTTGAGAGTTC 11481453
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| ||| | || || | | |||| ||| || | ||||| ||||| || || | |||
Sbjct 11481454 AGATACAAC-TGACAATG-TGAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCAGAC 11481511
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | || |||| || || || |||||||| || | || || | | |||
Sbjct 11481512 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGGACATTGGCTCATTAC 11481571
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|| |||||||||||| |||| || ||| | || | || ||||||| |||
Sbjct 11481572 AATATCCAGAAGGAGTCCACCCTTCATTTGGTTCTCCGTCTGAGGGGTGGC 11481622
>seq23
Length=22385789
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| || ||||| || ||||| ||| | || || ||| |
Sbjct 4579658 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCTTAGAGGTTGAATCG 4579717
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| |||| | | | || || ||||| || || | ||||| || |||||||| ||||
Sbjct 4579718 TCTGACACCATCGACAATGC-CAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGA 4579776
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| || ||||||| ||| || ||||||||||| |||| || ||||| ||||||
Sbjct 4579777 CCAGCAGCGTCTCATCTTCGCTGGAAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTA 4579836
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918
|||||||||||||||| | || || || || ||| | ||| | | || ||||
Sbjct 4579837 CAACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGCG 4579889
>seq49
Length=17126926
Score = 140 bits (154), Expect = 3e-28
Identities = 170/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || || ||||| || ||||| ||| | || || ||| |
Sbjct 13269705 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCA 13269764
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | |||||| || || | ||||| || |||||||| |||||
Sbjct 13269765 TCTGACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGAC 13269824
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || ||||||| ||| |||||||||||||| |||| || ||||| |||||||
Sbjct 13269825 CAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTAC 13269884
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918
|| |||||||||||| | || || || || ||| | ||| | | || ||||
Sbjct 13269885 AATATCCAGAAGGAGTCAACCCTCCACCTGGTGCTTCGCCTCCGTGGTGGCG 13269936
>seq57
Length=24021853
Score = 136 bits (150), Expect = 4e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| ||||| || || ||||||||| | || |||||| | ||
Sbjct 5891361 ATGCAGATTTTTGTGAAAACCCTCACCGGAAAGACCATCACCCTGGAGGTCGAAAGCTCC 5891420
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | ||||| |||||||| || |||||||
Sbjct 5891421 GACACCATTGACAACG-TGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACCA 5891479
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| ||| || || |||||||| || | || |||||| ||||||||
Sbjct 5891480 GCAGAGGCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGCCGAACCCTCGCTGACTACAA 5891539
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||| ||| | ||||||||
Sbjct 5891540 CATCCAGAAAGAGTCGACGCTGCA 5891563
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || || || || ||||| ||| | || || || | ||
Sbjct 5890905 ATGCAGATCTTTGTTAAAACACTTACCGGAAAGACCATAACCCTAGAGGTTGAGAGCTCC 5890964
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||||| || || | ||||||||||||||||| |||| |||
Sbjct 5890965 GACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCGGATCAG 5891024
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || || | ||| || |||||||| || |||| || || || ||||||||||
Sbjct 5891025 CAGAGGCTGATATTCGCCGGGAAACAGCTTGAAGACGGTCGAACACTGGCCGACTACAAC 5891084
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| |||| |||||
Sbjct 5891085 ATCCAGAAGGAGTCCACCTTGCACTTAGTG 5891114
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || || || |||||||| | || || || ||
Sbjct 5917018 ATGCAAATCTTCGTGAAGACACTGACTGGAAAGACCATCACGCTGGAGGTGGAGAGTTCC 5917077
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | |||| | ||| |||| ||||| ||||| ||||| |||| |||
Sbjct 5917078 GACACCATTGACAATGTCAAAGCAAAGATTCAGGACAAGGAGGGGATCCCACCGGATCAG 5917137
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || |||| ||| || || |||||||| || | | | ||||| |||||||||
Sbjct 5917138 CAGAGGCTGATCTTCGCCGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAAC 5917197
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| | || || ||||| ||
Sbjct 5917198 ATCCAGAAGGAGTCGACCCTCCATCTTGT 5917226
Score = 113 bits (124), Expect = 5e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || || || || ||||||||| | || |||||| | ||
Sbjct 5916334 ATGCAGATTTTTGTGAAAACCCTTACCGGGAAGACCATCACCCTGGAGGTCGAAAGCTCC 5916393
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | || || |||||||| || | |||||
Sbjct 5916394 GACACCATTGACAACG-TGAAGGCTAAGATCCAGGATAAGGAGGGCATTCCACCAGACCA 5916452
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| ||| || || |||||||| || | || |||||| |||||||||
Sbjct 5916453 GCAGAGGCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGCCGAACCCTCGCCGACTACAA 5916512
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||| || || ||| | || |||||
Sbjct 5916513 CATTCAAAAAGAGTCAACTCTGCA 5916536
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || || || |||||||| | || || || ||
Sbjct 5891817 ATGCAAATCTTCGTGAAGACTCTGACTGGGAAGACCATCACGCTGGAGGTGGAGAGTTCC 5891876
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | || | ||| |||| ||||| || || ||||| |||| |||
Sbjct 5891877 GACACCATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAAGGGATCCCACCGGATCAG 5891936
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| || || |||||||| || | | | ||||| |||||||||
Sbjct 5891937 CAGAGATTGATCTTCGCTGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAAC 5891996
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| || ||||| ||
Sbjct 5891997 ATCCAGAAGGAGTCCACCCTCCATCTTGT 5892025
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || || || || || || ||| | || || || | |
Sbjct 5915878 ATGCAGATCTTTGTCAAAACTCTTACCGGAAAGACGATAACCCTAGAGGTTGAGAGCTCG 5915937
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||||| || || | ||||||||||||||||| |||| |||
Sbjct 5915938 GACACGATCGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCGGATCAG 5915997
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| | || || | ||| || || ||||| || |||| || || || ||||||||||
Sbjct 5915998 CAGAGGCTAATATTCGCCGGGAAGCAGCTTGAAGACGGTCGAACTCTGGCCGACTACAAC 5916057
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| |||| |||||
Sbjct 5916058 ATCCAGAAGGAGTCCACCTTGCACTTAGTG 5916087
>seq12
Length=21026613
Score = 131 bits (144), Expect = 2e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| || ||||| || ||||| ||| | || || || ||
Sbjct 4557004 AAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTTGAGGTGGAGTCC 4557063
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | | |||| || || | ||||| || ||||| || |||||
Sbjct 4557064 TCTGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGAC 4557123
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|||||||| ||||| | ||| || || ||||| || |||| || ||||| ||||||
Sbjct 4557124 CAGCAACGCCTCATATTCGCCGGGAAGCAGCTCGAGGACGGCCGGACCCTAGCTGACTAC 4557183
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918
||||||||||||||| | || || || || ||| | ||| | || || ||||
Sbjct 4557184 AACATCCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGCCTCAGAGGTGGCG 4557235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515206918462320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |