Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq42 123 3e-23 seq49 109 6e-19 seq57 105 8e-18 seq23 104 3e-17 seq12 104 3e-17 seq24 84.2 3e-11 >seq42 Length=30274277 Score = 123 bits (136), Expect = 3e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||||||||| | ||||| || | ||| ||| || || || || ||||||||| Sbjct 11334524 CCGCCTCTTAAACGGAGAACCAAGTGAAGGGTGGACTCTTTCTGGATGTTATAATCAGCC 11334583 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | || || |||||||||||||| ||||| || | ||||||||| | || Sbjct 11334584 AATGTCCGGCCATCCTCGAGCTGCTTACCAGCAAATATAAGCCTCTGCTGGTCTGGGGGA 11334643 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||||| |||||| ||||| | | | ||||| |||| || Sbjct 11334644 ATACCCTCCTTGTCCTGGATTTTCGCTTTGACATTATCAATGGTGTCTGAGCTC---TCA 11334700 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 11334701 ACTTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 11334750 Score = 118 bits (130), Expect = 1e-21 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||| | || | |||||||| | ||| ||| || ||||| |||||||| || Sbjct 11520060 TCCACCTCTCAGCCGGAGAACCAAATGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGC 11520001 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || ||||| | || || ||||| |||||||| || ||||| | ||||||||| | || Sbjct 11520000 CAAGGTCCGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGGGG 11519941 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTC 43132 | | ||||||||| ||||||| || | | | | |||||| ||| || Sbjct 11519940 GATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTGTCAATCGTGTCAGAACTC---TC 11519884 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | ||||||||||| || || || ||||| ||||||||||||||| Sbjct 11519883 TACTTCAAGGGTGATGGTTTTTCCAGTGAGTGTCTTAACAAAGATTTGCATT 11519832 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||||||||||||||||| | || || ||||| |||||||| || Sbjct 11326990 TCCTTTTGAATGTTGTAATCAGCCAGAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAG 11327049 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||| || | || | | ||||||||| ||| ||| || | | Sbjct 11327050 ATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATCTTTGCCTTCACATTG 11327109 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | || || |||| ||||| || | |||||||| || || || ||||||||| Sbjct 11327110 TCGATTGTATCAGAGCTC---TCCACTTCAAGAGTGATGGTCTTCCCGGTCAGCGTCTTT 11327166 Query 43170 ACAAAGATTTGCATT 43184 ||||| ||||||||| Sbjct 11327167 ACAAATATTTGCATT 11327181 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| ||||| | ||||| || | || ||||| || || |||||||| ||| Sbjct 11482077 CCACCTCTCAAACGGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCGGCC 11482018 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | || || |||||||||||||| |||||||| | ||||||||| | || Sbjct 11482017 AATGTCCGACCATCTTCGAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGGG 11481958 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||||| ||||||| ||| | | | | ||||| ||| || Sbjct 11481957 ATACCCTCCTTGTCCTGGATTTTTGCTTTAACGTTATCAATGGTGTCTGAACTC---TCA 11481901 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 11481900 ACTTCAAGTGTGATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 11481851 Score = 109 bits (120), Expect = 6e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| ||||| | ||||| || | |||| ||| || || || || ||||||||| Sbjct 11481849 CCACCTCTCAAACGGAGAACCAAGTGAAGTGTGGACTCTTTCTGGATGTTATAATCAGCC 11481790 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | || || ||||||||||| || || ||||| | ||||||||| | || Sbjct 11481789 AATGTCCGGCCATCCTCAAGCTGCTTACCTGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 11481730 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | || |||||||||| |||||| ||| | | | | ||||| ||| || Sbjct 11481729 ATGCCCTCCTTGTCCTGGATTTTCGCTTTAACATTATCGATGGTGTCTGAACTC---TCA 11481673 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || ||||| || || || || ||||| ||||| |||||||| Sbjct 11481672 ACTTCAAGGGTAATGGTCTTACCAGTAAGGGTCTTCACAAAAATTTGCAT 11481623 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| || ||||||||||||||||||| | || || ||||| |||||||| || Sbjct 11520251 TCCTTTTGTATGTTGTAATCAGCCAGAGTCCTTCCATCCTCAAGCTGTTTACCAGCAAAG 11520192 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||| || | || | | ||||||||| ||| || || | | Sbjct 11520191 ATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATCTTCGCCTTCACATTG 11520132 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| ||||| || | |||||||| || || || ||||||||| Sbjct 11520131 TCGATTGTGTCAGAGCTC---TCCACCTCAAGAGTGATGGTCTTCCCGGTCAGCGTCTTT 11520075 Query 43170 ACAAAGATTTGCATT 43184 ||||| ||||||||| Sbjct 11520074 ACAAATATTTGCATT 11520060 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| |||||||||||||| |||| |||||| | || ||||||||||| ||||| ||| Sbjct 11333648 TCCTTCTGAATATTGTAATCTGCCAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAAT 11333707 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| | |||||| || | || | | |||||||| | ||| | |||| || | | Sbjct 11333708 ATGAGCCTCTGCTGATCTGGAGGGATACCCTCCTTGT-CTTGAATCTTTGCCTTCACATT 11333766 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | ||||| ||||| || || || ||||| Sbjct 11333767 ATCTATGGTGTCAGAGCTC---TCCACCTCAAGTGTGATAGTTTTACCTGTCAGGGTCTT 11333823 Query 43169 TACAAAGATTTGCAT 43183 ||||| || ||||| Sbjct 11333824 CACAAATATCTGCAT 11333838 Score = 107 bits (118), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || |||||||| ||||||| ||| || | || ||||||||||||||||| || Sbjct 11334104 TCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAG 11334163 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | ||||||||||| || | | ||||||||| ||||||| ||| | | Sbjct 11334164 ATTAGCCTCTGCTGGTCGGGTGGAATACCTTCCTTGTCCTGGATTTTTGCTTTCACATTG 11334223 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| ||| || || || | ||||| ||||| || || || ||||| Sbjct 11334224 TCGATAGTGTCTGAACTC---TCAACTTCAAGGGTGATAGTTTTACCAGTAAGGGTCTTC 11334280 Query 43170 ACAAAGATTTGCAT 43183 ||||| |||||||| Sbjct 11334281 ACAAATATTTGCAT 11334294 Score = 104 bits (114), Expect = 3e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| || | ||| |||||| || || || ||||||||| Sbjct 11334752 CCACCTCTCAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAATCAGCC 11334811 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | || || |||||||||||||| || || || | ||||||||| | || Sbjct 11334812 AATGTCCGGCCATCCTCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGA 11334871 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA--TTCCA 43134 | | |||||||||| ||| ||| || | ||| | || ||| || | || | Sbjct 11334872 ATACCCTCCTTGTCCTGGATCTTTGCCTTCA-CGTTGTCA-ATTGTATCTGAACTCTCAA 11334929 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | |||||||| || || ||||| || || ||||| ||||||||| Sbjct 11334930 CTTCAAGTGTGATGGTCTTTCCAGTTAGTGTTTTGACAAATATTTGCATT 11334979 Score = 102 bits (112), Expect = 9e-17 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| |||||||||||||| ||| |||||| | || ||||||||||| ||||| || Sbjct 11482725 TCCTTCTGAATATTGTAATCTACCAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAAG 11482666 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| | |||||| || | || | || |||||||| | ||| | |||| || | | Sbjct 11482665 ATGAGCCTCTGCTGATCTGGAGGGATGCCCTCCTTGT-CTTGAATCTTTGCCTTCACATT 11482607 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | ||||| ||||| || || || ||||| Sbjct 11482606 ATCTATGGTGTCAGAGCTC---TCCACCTCTAGTGTGATCGTTTTACCTGTCAGGGTCTT 11482550 Query 43169 TACAAAGATTTGCAT 43183 ||||| || ||||| Sbjct 11482549 CACAAAAATCTGCAT 11482535 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||||| ||| || | || ||||||||||||||||| || Sbjct 11482269 TCCTTCTGTATGTTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAG 11482210 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || || | ||||||||| | || | | ||||||||| ||| |||||| ||| | | Sbjct 11482209 ATTAGCCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCC-TGAATTTTTGCTTTCACATT 11482151 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| ||| || || || | ||||| ||||| || || || ||||| Sbjct 11482150 ATCAATAGTGTCTGAACTC---TCTACTTCAAGGGTGATAGTTTTACCAGTAAGGGTCTT 11482094 Query 43169 TACAAAGATTTGCAT 43183 ||||| |||||||| Sbjct 11482093 CACAAAAATTTGCAT 11482079 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||| | |||||||| | ||| |||||| || |||||||||| |||| Sbjct 11481621 CCACCCCTCAGACGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATGAGCC 11481562 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | || || |||||||||||||| || || || | ||||||||| | || Sbjct 11481561 AATGTCCGGCCATCCTCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGA 11481502 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA--TTCCA 43134 | | |||||||||| ||| ||| || | | | | || ||| || | || | Sbjct 11481501 ATACCCTCCTTGTCCTGGATCTTTGCCTTCA-CATTGTCA-GTTGTATCTGAACTCTCAA 11481444 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | ||||| || || | || ||||| || ||||| ||||||||| Sbjct 11481443 CTTCAAGTGTGATTGTCTTTCTAGTAAGCGTTTTGACAAATATTTGCATT 11481394 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| ||||| ||||||||||| || ||||| | || || Sbjct 11520497 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCC 11520438 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | |||||| || || || || || | |||||| || | || | | |||||||||| || Sbjct 11520437 AACTGCTTCCCTGCAAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCC-TG 11520379 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | |||| | || | | | | ||||| |||| ||||| || | ||||| || Sbjct 11520378 AATTTTGGCCTTCACATTATCTATGGTGTCTGAGCTC---TCCACCTCTAGTGTGATCGT 11520322 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||| ||||| || ||||| Sbjct 11520321 CTTTCCCGTCAGGGTCTTCACAAATATCTGCAT 11520289 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| |||||||| | || || | |||||| || || || Sbjct 11326761 CTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCCAACTGCTTCCCTGCAAA 11326820 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| | |||||| || | || | | ||||||||| ||| |||||| || | Sbjct 11326821 GATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCC-TGAATTTTTGCCTTCACAT 11326879 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | || || || || ||||| || |||| Sbjct 11326880 TATCTATAGTGTCTGAGCTC---TCAACCTCTAGTGTAATTGTCTTTCCCGTCAGGGTCT 11326936 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 11326937 TCACAAATATCTGCAT 11326952 >seq49 Length=17126926 Score = 109 bits (120), Expect = 6e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || || || || || |||| || ||||| || |||||||| Sbjct 13269899 CTCCTTCTGGATATTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTGCCAGCGAA 13269840 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || |||||||| ||| || |||| | Sbjct 13269839 GATGAGGCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 13269780 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||||| || || | || ||||| || |||||||| ||||| || Sbjct 13269779 ATCGATCGTGTCAGATGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTCTTCAC 13269720 Query 43172 AAAGATTTGCATTTT 43186 || || ||||| || Sbjct 13269719 GAAAATCTGCATCTT 13269705 >seq57 Length=24021853 Score = 105 bits (116), Expect = 8e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || |||||| ||||| ||||||||||| ||||| ||| | Sbjct 5917005 ACGAAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTTCGCCC 5916946 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| || |||| ||||||||| | || | | ||||| Sbjct 5916945 ATCCTCAAGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCTTCCTT 5916886 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | || | || ||| | | | |||||| ||| || || | |||| Sbjct 5916885 GTCC-TGAATCTTCGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGA 5916827 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || || || ||||| || ||||| Sbjct 5916826 TGGTCTTTCCGGTGAGGGTTTTCACAAAAATCTGCAT 5916790 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| |||| | | || || |||||||| || ||||| Sbjct 5917209 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCGGCGAA 5917150 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || | |||||| || | || | | |||||||||| ||| | |||| ||||| Sbjct 5917149 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCC-TGAATCTTTGCTTTGACAT 5917091 Query 43111 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| ||||| || | ||||||||| || || || || |||| Sbjct 5917090 TGTCAATGGTGTCGGAACTC---TCCACCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCT 5917034 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 5917033 TCACGAAGATTTGCAT 5917018 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| | | ||| | |||||| |||| || ||| || || || ||||| ||||| Sbjct 5891588 TCCTCCACGGAGACGGAGCACCAAGTGCAGCGTCGACTCTTTCTGGATGTTGTAGTCAGC 5891529 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || ||||||||||||||||| || || | ||||||||| | || Sbjct 5891528 GAGGGTTCGGCCATCTTCCAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCCGGTGG 5891469 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | || |||||||||| ||| || || | ||| | | | |||||| ||| | Sbjct 5891468 AATGCCCTCCTTGTCCTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAGCTTTCGA 5891410 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | |||||||| || || || || || || ||||| || ||||| Sbjct 5891409 CCTCCAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAAATCTGCAT 5891361 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| |||| | | || || |||||||| |||||||| Sbjct 5892008 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCAGCGAA 5891949 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | || |||||| || | || | | ||||||||| ||| | |||| ||| | Sbjct 5891948 GATCAATCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCC-TGAATCTTTGCTTTCACAT 5891890 Query 43111 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| ||||| || | ||||||||| || || || || |||| Sbjct 5891889 TATCAATGGTGTCGGAACTC---TCCACCTCCAGCGTGATGGTCTTCCCAGTCAGAGTCT 5891833 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 5891832 TCACGAAGATTTGCAT 5891817 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | |||||| |||| || ||| |||||||| ||||| || || Sbjct 5916560 CCTCCACGAAGACGGAGCACCAAGTGCAGAGTTGACTCTTTTTGAATGTTGTAGTCGGCG 5916501 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||||||||||||||| || || | ||||||||| | || Sbjct 5916500 AGGGTTCGGCCATCTTCCAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 5916441 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || |||||| ||| ||| || || | ||| | | | |||||| ||| || Sbjct 5916440 ATGCCCTCCTTATCCTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAGCTTTCGAC 5916382 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || || || || ||||| || ||||| Sbjct 5916381 CTCCAGGGTGATGGTCTTCCCGGTAAGGGTTTTCACAAAAATCTGCAT 5916334 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || ||||||||||| || || || ||| | || || |||||||| || || || Sbjct 5916297 CTCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCTTCGAGCTGCTTGCCGGCAAA 5916238 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | | |||||||||| || | || | || | ||| Sbjct 5916237 GATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCC-TGGATCTTGGCTTTAACGT 5916179 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| ||| || || | || ||||| || || || || || | Sbjct 5916178 TGTCGATCGTGTCTGAGCT---TTCGACTTCCAAAGTAATGGTCTTTCCTGTAAGAGTTT 5916122 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 5916121 TCACAAATATCTGCAT 5916106 >seq23 Length=22385789 Score = 104 bits (114), Expect = 3e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||| || |||||||| Sbjct 4579852 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCAGCGAA 4579793 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| || ||| || | Sbjct 4579792 GATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTG-GCAT 4579734 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| |||||| || || | || ||||| || |||||||| || || | Sbjct 4579733 TGTCGATGGTGTCAGACGATTCAACCTCTAAGGTTATGGTCTTCCCCGTTAGGGTTTTCA 4579674 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 4579673 CGAAGATCTGCATCTT 4579658 >seq12 Length=21026613 Score = 104 bits (114), Expect = 3e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || ||||| |||| || |||||||| || ||||| Sbjct 4557198 CTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 4557139 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 |||||| || |||||||| | || | || ||||||||| ||| || || | | Sbjct 4557138 TATGAGGCGTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 4557079 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || ||||| || | || ||||| || |||||||| || || || Sbjct 4557078 GTCGATGGTGTCAGAGGACTCCACCTCAAGGGTTATGGTCTTACCCGTTAGGGTTTTCAC 4557019 Query 43172 AAAGATTTGCATTTT 43186 ||||| ||||| || Sbjct 4557018 GAAGATCTGCATCTT 4557004 >seq24 Length=23006712 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| ||| || || ||| ||||||||| |||| |||||||||||||||| ||||| Sbjct 5004682 AAAATATTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACT 5004623 Query 60118 CACCACTATACTAC 60131 |||||||||||||| Sbjct 5004622 CACCACTATACTAC 5004609 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| | || || | || ||| ||||||||| |||| |||||||||||||||| ||||| Sbjct 13286816 AAAAATCTCGCCGCTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGTATACT 13286757 Query 60118 CACCACTATACTAC 60131 |||||||||||||| Sbjct 13286756 CACCACTATACTAC 13286743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571803969297960