Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07]
1,907 sequences; 486,196,837 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq42 129 5e-25
seq57 107 2e-18
>seq42
Length=30274277
Score = 129 bits (142), Expect = 5e-25
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||||||||| | | |||||||| || || ||||||||| |||||||||||
Sbjct 11334295 GCCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGC 11334354
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | ||| | || ||||| ||||| || || ||||| | || ||| ||||| || ||
Sbjct 11334355 CAATGTCCGACCATCTTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGG 11334414
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||||||||||||| ||||| || || | | | |||| || ||| ||
Sbjct 11334415 AATACCCTCCTTGTCCTGGATTTTAGCTTTCACATTATCGATGGTGTCTGAACTCTCAAC 11334474
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344
|| | |||||| || || || || || ||||||||||| ||||||||| |||||
Sbjct 11334475 TTCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATGCCGCCTC 11334530
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| |||||||||||||||||| || ||| ||| | || |||
Sbjct 11520497 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCC 11520438
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || || || || |||| || ||| || || ||||| | |||||||||||| |
Sbjct 11520437 AACTGCTTCCCTGCAAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCCTGA 11520378
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | |||| | ||||||||| | || ||||||||
Sbjct 11520377 ATTTTGGCCTTCACATTATCTATGGTGTCTGAGCTCTCCACCTCTAGTGTGATCGTCTTT 11520318
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| ||||||||||| || |||||
Sbjct 11520317 CCCGTCAGGGTCTTCACAAATATCTGCAT 11520289
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||||||||| | | |||||||| || || |||||||| |||||||| |||
Sbjct 11482078 GCCACCTCTCAAACGGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCGGC 11482019
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | ||| | || || || || || || || ||||| | || ||| ||||| || ||
Sbjct 11482018 CAATGTCCGACCATCTTCGAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGG 11481959
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||||||||||||| |||||| ||||| | | | |||| || ||| ||
Sbjct 11481958 GATACCCTCCTTGTCCTGGATTTTTGCTTTAACGTTATCAATGGTGTCTGAACTCTCAAC 11481899
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | || || || || || || || ||||||||||| |||||||||
Sbjct 11481898 TTCAAGTGTGATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 11481850
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||||||||| | | |||||||| || ||| ||| ||||| ||||| || ||
Sbjct 11481850 GCCACCTCTCAAACGGAGAACCAAGTGAAGTGTGGACTCTTTCTGGATGTTATAATCAGC 11481791
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | || | || || || || || || || || || | || ||| ||||| || ||
Sbjct 11481790 CAATGTCCGGCCATCCTCAAGCTGCTTACCTGCAAAAATGAGCCTCTGCTGGTCTGGGGG 11481731
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||||||| ||||| ||||| | | | |||| || ||| ||
Sbjct 11481730 AATGCCCTCCTTGTCCTGGATTTTCGCTTTAACATTATCGATGGTGTCTGAACTCTCAAC 11481671
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | |||||| ||||| || || || ||||||||||| |||||||||
Sbjct 11481670 TTCAAGGGTAATGGTCTTACCAGTAAGGGTCTTCACAAAAATTTGCATG 11481622
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || |||||||||||||||||| || || ||| | || |||
Sbjct 11326744 ACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCC 11326803
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || || || || || | || ||| || || ||||| | || ||||||||| |
Sbjct 11326804 AACTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCCTGA 11326863
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|||||| ||| || | | |||| | ||| ||||| | ||||| |||||
Sbjct 11326864 ATTTTTGCCTTCACATTATCTATAGTGTCTGAGCTCTCAACCTCTAGTGTAATTGTCTTT 11326923
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| ||||||||||| || |||||
Sbjct 11326924 CCCGTCAGGGTCTTCACAAATATCTGCAT 11326952
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||||||||| | | |||| ||| || ||| ||| ||||||||||| || || |
Sbjct 11327638 CCACCTCTCAAACGAAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTTATAATCTGCC 11327697
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| | | | || || || || ||||| || || ||||||| || ||||| || ||
Sbjct 11327698 AATGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGG 11327757
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||||||| ||||| |||||| | | | | || || |||||
Sbjct 11327758 ATACCCTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGAACTTTCCACT 11327817
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||| || ||||| || || || || || |||||||| |||||
Sbjct 11327818 TCAAGGGTTATAGTCTTCCCAGTAAGGGTTTTAACAAAGATCTGCAT 11327864
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||||||||||| | || | ||| || ||| ||| ||||||||||| || || |
Sbjct 11519603 CCACCTCTCAATCGAAGGACGAGGTGGAGTGTGGACTCTTTCTGAATGTTATAATCTGCC 11519544
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| | | || || || || ||||| || || ||||||| || ||||| || ||
Sbjct 11519543 AAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGG 11519484
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||||||| ||||| |||||| | | | | || || |||||
Sbjct 11519483 ATACCCTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGAACTTTCCACT 11519424
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||| || ||||| || || || ||||| |||||||| |||||
Sbjct 11519423 TCAAGGGTTATAGTCTTCCCAGTAAGGGTCTTAACAAAGATCTGCAT 11519377
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||| | | ||||| || || ||| ||| |||||||||||||| || |
Sbjct 11520059 CCACCTCTCAGCCGGAGAACCAAATGAAGGGTGGACTCTTTCTGAATGTTGTAATCTGCC 11520000
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| ||| | || || || ||||| || || || || | || ||| ||||| || ||
Sbjct 11519999 AAGGTCCGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 11519940
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||||||||| |||||| ||| || | | |||| || ||| ||
Sbjct 11519939 ATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTGTCAATCGTGTCAGAACTCTCTACT 11519880
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||| || || || || || || ||||| ||||||||||||||
Sbjct 11519879 TCAAGGGTGATGGTTTTTCCAGTGAGTGTCTTAACAAAGATTTGCAT 11519833
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
||||||||||| | | |||||||| || ||| ||||||||| ||||| || ||
Sbjct 11334751 GCCACCTCTCAGACGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAATCAGC 11334810
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | || | || ||||| || || || || || || | || ||| ||||| |||||
Sbjct 11334811 CAATGTCCGGCCATCCTCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGAGG 11334870
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||||||||||||| || ||| ||| || | | | || || ||| ||
Sbjct 11334871 AATACCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCAATTGTATCTGAACTCTCAAC 11334930
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | || || ||||| || || || || || ||||| ||||||||
Sbjct 11334931 TTCAAGTGTGATGGTCTTTCCAGTTAGTGTTTTGACAAATATTTGCAT 11334978
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| |||||||| | | ||| | ||| || ||| ||| || |||||||| || ||| |
Sbjct 11334980 CCTCCTCTCAAACGAAGTACAAGGTGTAGGGTGGACTCTTTTTGAATGTTATAATCGGCC 11335039
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| | | | || || || || ||||| || || ||||||| || ||||| || ||
Sbjct 11335040 AAAGTCCTACCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAGGGGGG 11335099
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||||||| |||||| |||||| | | | | || || ||| ||
Sbjct 11335100 ATACCCTCCTTGTCTTGGATTTTTGCCTTAACATTGTCAATGGTATCAGAACTCTCAACT 11335159
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | || || || || || || || ||||| |||||||| |||||
Sbjct 11335160 TCAAGAGTTATGGTTTTTCCAGTAAGGGTCTTAACAAAGATCTGCAT 11335206
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||||||||| ||||| || || || | || || || || ||||| || |||
Sbjct 11333648 TCCTTCTGAATATTGTAATCTGCCAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAAT 11333707
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|| | || ||| || || ||||| | |||||||||||| ||| ||| ||| ||
Sbjct 11333708 ATGAGCCTCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGAATCTTTGCCTTCACATTA 11333767
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | |||| | ||||||||| | || || || || || ||||| |||||||||
Sbjct 11333768 TCTATGGTGTCAGAGCTCTCCACCTCAAGTGTGATAGTTTTACCTGTCAGGGTCTTCACA 11333827
Query 45326 AAGATTTGCAT 45336
|| || |||||
Sbjct 11333828 AATATCTGCAT 11333838
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
|||||||||| || ||||| ||||||||||| || ||| | || || || ||
Sbjct 11333863 GTGCAGCGTGGATTCTTTCTGTATGTTGTAGTCAGCCAAAGTGCGGCCATCCTCAAGCTG 11333922
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|||||| || || |||| || ||||||||| ||||| | || ||||||||| |||||
Sbjct 11333923 TTTTCCAGCAAAGATCAGCCTCTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATTTT 11333982
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
| ||| || | | |||| | ||| || || | || || || || || ||
Sbjct 11333983 TGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCAAGAGTGATTGTTTTACCAGT 11334042
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
| ||||||||||| || |||||
Sbjct 11334043 TAAGGTCTTCACAAAAATCTGCAT 11334066
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
||| ||||| || | | |||||||| || ||| ||| ||||| ||||| || ||
Sbjct 11334523 GCCGCCTCTTAAACGGAGAACCAAGTGAAGGGTGGACTCTTTCTGGATGTTATAATCAGC 11334582
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | || | || || || || || || || ||||| | || ||| ||||| || ||
Sbjct 11334583 CAATGTCCGGCCATCCTCGAGCTGCTTACCAGCAAATATAAGCCTCTGCTGGTCTGGGGG 11334642
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||||||||||||| ||||| || || | | | |||| | ||| ||
Sbjct 11334643 AATACCCTCCTTGTCCTGGATTTTCGCTTTGACATTATCAATGGTGTCTGAGCTCTCAAC 11334702
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | ||| || || || || || || ||||||||||| |||||||||
Sbjct 11334703 TTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 11334751
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/194 (70%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTC--AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203
|||||||| ||||||||||| | |||| ||| | || || || || || || || |
Sbjct 11482269 TCCTTCTGTATGTTGTAGTCAGCCAAAGTT--CGACCATCTTCTAGCTGCTTACCAGCAA 11482212
Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263
| || | || ||| ||||| || || | ||| ||||||||| ||||||| || ||
Sbjct 11482211 AGATTAGCCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCCTGAATTTTTGCTTTCACAT 11482152
Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | |||| || ||| || || | ||| || || || || || || |||||||
Sbjct 11482151 TATCAATAGTGTCTGAACTCTCTACTTCAAGGGTGATAGTTTTACCAGTAAGGGTCTTCA 11482092
Query 45324 CAAAGATTTGCATG 45337
|||| |||||||||
Sbjct 11482091 CAAAAATTTGCATG 11482078
>seq57
Length=24021853
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||||||||| ||| | | || ||||| || || ||||||||
Sbjct 5917209 CTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCAGCTGCTTCCCGGCGAA 5917150
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|||| || ||| || || || || | |||||||||||| ||| ||| || ||
Sbjct 5917149 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGAATCTTTGCTTTGACATT 5917090
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| || ||||||||||| || || ||||| || ||||| ||||||||
Sbjct 5917089 GTCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTCTTTCCAGTCAGTGTCTTCAC 5917030
Query 45325 AAAGATTTGCAT 45336
|||||||||||
Sbjct 5917029 GAAGATTTGCAT 5917018
Score = 105 bits (116), Expect = 5e-18
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| ||| | | || ||||
Sbjct 5892024 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCTTCCA 5891965
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || || ||||| ||||| | ||| || || || || | || ||||||||| ||
Sbjct 5891964 GCTGCTTCCCAGCGAAGATCAATCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCCTGAA 5891905
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| ||| || || | | | |||| || ||||||||||| || || ||||| |
Sbjct 5891904 TCTTTGCTTTCACATTATCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTCTTCC 5891845
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| |||||||||||||| |||||||||||
Sbjct 5891844 CAGTCAGAGTCTTCACGAAGATTTGCAT 5891817
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|| ||||||| ||| ||||||||| |||||||||||| |||| ||| |||| ||
Sbjct 5891113 ACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTTCGACCGTCTTCA 5891054
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| ||||||||||||| || ||| || || || || | ||||| |||||
Sbjct 5891053 AGCTGTTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGGATGCCCTCTTTGTCTTGG 5890994
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | |||| | ||| ||||| | ||| || |||||
Sbjct 5890993 ATCTTGGCCTTGACATTATCGATCGTGTCGGAGCTCTCAACCTCTAGGGTTATGGTCTTT 5890934
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || || |||||||| |||||
Sbjct 5890933 CCGGTAAGTGTTTTAACAAAGATCTGCAT 5890905
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|| ||||||| ||| ||||||||| |||||||||||| ||| ||| |||| ||
Sbjct 5916086 ACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTTCGACCGTCTTCA 5916027
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||||||||| | || ||| || || || || | ||||| |||||
Sbjct 5916026 AGCTGCTTCCCGGCGAATATTAGCCTCTGCTGATCCGGTGGGATGCCCTCTTTGTCTTGG 5915967
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| | ||| ||||| | ||| ||||||||
Sbjct 5915966 ATCTTGGCCTTGACATTATCGATCGTGTCCGAGCTCTCAACCTCTAGGGTTATCGTCTTT 5915907
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || ||||| || |||||||| |||||
Sbjct 5915906 CCGGTAAGAGTTTTGACAAAGATCTGCAT 5915878
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| || ||| || ||||||||||| ||| || || |||| |||
Sbjct 5916770 ACCAAGTGCAGAGTTGACTCTTTTTGAATGTTGTAATCGGCGAGGGTTCGGCCGTCTTCC 5916711
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| |||| || ||| ||||| || || | |||||||| |||
Sbjct 5916710 AGCTGCTTTCCGGCGAAAATCAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTGG 5916651
Query 45248 ATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
| | || |||| || | | | | |||| | ||| ||||||| ||| || |||||
Sbjct 5916650 A-TCTTCGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCGACCTCCAGGGTGATGGTCTT 5916592
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || || ||||| || |||||
Sbjct 5916591 TCCGGTGAGGGTTTTTACAAAAATCTGCAT 5916562
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||||||| ||| ||||| ||||||||||| || || | || |||
Sbjct 5891569 ACCAAGTGCAGCGTCGACTCTTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCATCTTCC 5891510
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| || ||| ||||| || || | ||||||||||||
Sbjct 5891509 AGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTGTCCTGG 5891450
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | || ||||||| ||| || |||||
Sbjct 5891449 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTT 5891390
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || |||||||| || |||||
Sbjct 5891389 CCGGTGAGGGTTTTCACAAAAATCTGCAT 5891361
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| || ||| || ||||||||||||||| || || | || |||
Sbjct 5916542 ACCAAGTGCAGAGTTGACTCTTTTTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCTTCC 5916483
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| || ||| ||||| || || | |||||||| |||
Sbjct 5916482 AGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTGG 5916423
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | || ||||||| ||| || |||||
Sbjct 5916422 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTC 5916363
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || |||||||| || |||||
Sbjct 5916362 CCGGTAAGGGTTTTCACAAAAATCTGCAT 5916334
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||| ||||| || ||||| ||| || || | || ||
Sbjct 5891341 ACCAAGTGAAGAGTTGACTCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCTTCG 5891282
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || |||| || ||| ||||| || || | |||||||||||||
Sbjct 5891281 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGG 5891222
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||||| | | | |||| | || || |||| ||||| |||||
Sbjct 5891221 ATCTTGGCTTTAACATTGTCGATGGTGTCGGAGCTTTCGACTTCCAAAGTAATGGTCTTT 5891162
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || |||||||||||||| || |||||
Sbjct 5891161 CCTGTAAGAGTCTTCACAAATATCTGCAT 5891133
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || |||||||||||||||||| || || || | || ||
Sbjct 5916998 ACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTTCGCCCATCCTCA 5916939
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| | ||| ||||| || || | || ||||||||| |
Sbjct 5916938 AGCTGCTTGCCGGCGAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCTTCCTTGTCCTGA 5916879
Query 45248 ATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
| | || |||| || | | | | |||| | || ||||||| ||| || |||||
Sbjct 5916878 A-TCTTCGCTTTCACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTT 5916820
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || |||||||| || |||||
Sbjct 5916819 TCCGGTGAGGGTTTTCACAAAAATCTGCAT 5916790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395066017835047
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |