Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq42 163 7e-35 seq57 145 2e-29 seq23 120 7e-22 seq44 95.1 3e-14 >seq42 Length=30274277 Score = 163 bits (180), Expect = 7e-35 Identities = 166/214 (78%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | ||||||||| ||||||||||| || || | | || | || || Sbjct 11333626 AAGAACAAGATGAAGTGTAGATTCCTTCTGAATATTGTAATCTGCCAAGGTCCGCCCATC 11333685 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||||| || ||||||||||| || |||||||| ||||| ||||| || || || || || Sbjct 11333686 CTCTAGCTGCTTTCCAGCAAATATGAGCCTCTGCTGATCTGGAGGGATACCCTCCTTGTC 11333745 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||||| || ||||| |||| ||| || || | || ||||| ||||| |||| Sbjct 11333746 TTGAATCTTTGCCTTCACATTATCTATGGTGTC-AGAGCTCTCCACCTCAAGTGTGATAG 11333804 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || || || || |||||||||||||| Sbjct 11333805 TTTTACCTGTCAGGGTCTTCACAAATATCTGCAT 11333838 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || ||||| | ||| | || || || || | || ||||| ||||| ||||| |||||| Sbjct 11334065 ATACCCCCACGTAGGCGGAGAACAAGGTGAAGGGTTGATTCCTTCTGTATATTGTAGTCA 11334124 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | ||||| ||| |||||||| || || |||||||| ||||||||||| || || || Sbjct 11334125 GCCAAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAGATTAGCCTCTGCTGGTCGGGT 11334184 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||| || |||||||| ||||| || | || || | || Sbjct 11334185 GGAATACCTTCCTTGTCCTGGATTTTTGCTTTCACATTGTCGATAGTGTCTGAACTCTCA 11334244 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| ||||||||||| || || |||||||| ||||| Sbjct 11334245 ACTTCAAGGGTGATAGTTTTACCAGTAAGGGTCTTCACAAATATTTGCAT 11334294 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || ||||| | || | || || || || | || ||||| ||||| || || |||||| Sbjct 11482308 ATACCCCCACGTAAGCGGAGAACAAGGTGAAGGGTTGATTCCTTCTGTATGTTGTAGTCA 11482249 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | ||||| ||| |||||||| || || |||||||| ||||||||||| || ||||| Sbjct 11482248 GCCAAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGT 11482189 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || |||||||| |||||||| ||||| || | || || | ||| Sbjct 11482188 GGAATACCTTCCTTGTCCTGAATTTTTGCTTTCACATTATCAATAGTGTCTGAACTCTCT 11482129 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| ||||||||||| || || ||||| || ||||| Sbjct 11482128 ACTTCAAGGGTGATAGTTTTACCAGTAAGGGTCTTCACAAAAATTTGCAT 11482079 Score = 154 bits (170), Expect = 3e-32 Identities = 164/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | |||||||||||||| ||||| ||||||| | ||| | || || Sbjct 11482519 AAGAACAAGGTGAAGCGTAGATTCTTTCTGTATATTGTAGTCAGCCAAAGTGCGGCCATC 11482460 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || |||||||||||||| || ||||||||||| |||||||| || ||||| || || Sbjct 11482459 CTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGTTGGTCAGGAGGAATGCCTTCCTTGTC 11482400 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 |||||| ||||| || ||||| || | || || || | || || || || || || | Sbjct 11482399 CTGAATTTTTGCCTTGACATTGTCAATTGTGTC-TGAGCTCTCAACTTCAAGAGTGATTG 11482341 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | |||||||| | || || |||||||||||||| Sbjct 11482340 TTTTACCAGTTAAGGTCTTCACAAATATCTGCAT 11482307 Score = 154 bits (170), Expect = 3e-32 Identities = 164/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | ||||||||| ||||||||||| || || | || | || || Sbjct 11482747 AAGAACAAGATGAAGTGTAGATTCCTTCTGAATATTGTAATCTACCAAGGTCCGCCCATC 11482688 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||||| || ||||||||||| || |||||||| ||||| ||||| || || || || || Sbjct 11482687 CTCTAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGATCTGGAGGGATGCCCTCCTTGTC 11482628 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||||| || ||||| |||| ||| || || | || ||||||||||| || | Sbjct 11482627 TTGAATCTTTGCCTTCACATTATCTATGGTGTCAG-AGCTCTCCACCTCTAGTGTGATCG 11482569 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || || || || ||||| |||||||| Sbjct 11482568 TTTTACCTGTCAGGGTCTTCACAAAAATCTGCAT 11482535 Score = 147 bits (162), Expect = 5e-30 Identities = 153/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| || || |||| ||||| | ||| || || | || || || Sbjct 11326756 GTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCCAACTGCTTCCCT 11326815 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| ||||| ||||| || ||||| || |||||||| ||||| || Sbjct 11326816 GCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCCTGAATTTTTGCCTTC 11326875 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| |||| || || || | || |||||||||||||| ||||| || || || || Sbjct 11326876 ACATTATCTATAGTGTCTG-AGCTCTCAACCTCTAGTGTAATTGTCTTTCCCGTCAGGGT 11326934 Query 104542 TTTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 11326935 CTTCACAAATATCTGCAT 11326952 Score = 145 bits (160), Expect = 2e-29 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | || || || || | ||| || ||||||||||| ||||| || Sbjct 11327407 ATTCCACCTCTCAAACGGAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTTATAATCG 11327466 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | ||| || || || || || || |||||||||||||| | ||| || |||||||| Sbjct 11327467 GCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCAGGG 11327526 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || || || || || || |||||||| || | ||||| || | || Sbjct 11327527 GGGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCAATCGTATC-AGAGCTCTC 11327585 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || ||||| ||||| ||||| || |||||||| |||||| Sbjct 11327586 AACTTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTAACAAATATTTGCATT 11327637 Score = 145 bits (160), Expect = 2e-29 Identities = 175/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| ||||| | | ||| || || || | ||| || ||||||||||| || Sbjct 11327628 TATTTGCATTCCACCTCTCAAACGAAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTT 11327687 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||| || | | || || || || || || || |||||||||||||| | ||| || || Sbjct 11327688 ATAATCTGCCAATGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTG 11327747 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||||| || || || || || || || || || || || ||||| || | |||||| Sbjct 11327748 GTCAGGGGGGATACCCTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGA 11327807 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||| || || || || |||||||| |||||||| ||||| ||||| |||||||| Sbjct 11327808 ACTTTCCACTTCAAGGGTTATAGTCTTCCCAGTAAGGGTTTTAACAAAGATCTGCAT 11327864 Score = 145 bits (160), Expect = 2e-29 Identities = 175/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| ||||| | | ||| || || || | ||| || ||||||||||| || Sbjct 11519613 TATTTGCATTCCACCTCTCAATCGAAGGACGAGGTGGAGTGTGGACTCTTTCTGAATGTT 11519554 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||| || | | ||| || || || || || || |||||||||||||| | ||| || || Sbjct 11519553 ATAATCTGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTG 11519494 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||||| || || || || || || || || || || || ||||| || | |||||| Sbjct 11519493 GTCAGGGGGGATACCCTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGA 11519434 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||| || || || || |||||||| |||||||| || || ||||| |||||||| Sbjct 11519433 ACTTTCCACTTCAAGGGTTATAGTCTTCCCAGTAAGGGTCTTAACAAAGATCTGCAT 11519377 Score = 145 bits (160), Expect = 2e-29 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | || || || || | ||| || ||||||||||| ||||| || Sbjct 11519834 ATTCCACCTCTCAAACGGAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTTATAATCG 11519775 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | ||| || || || || || || |||||||||||||| | ||| || |||||||| Sbjct 11519774 GCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCAGGG 11519715 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || || || || || || |||||||| || | ||||| || | || Sbjct 11519714 GGGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCAATCGTATC-AGAGCTCTC 11519656 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || ||||| ||||| ||||| || |||||||| |||||| Sbjct 11519655 AACTTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTAACAAATATTTGCATT 11519604 Score = 141 bits (156), Expect = 2e-28 Identities = 174/237 (73%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| ||||| | | |||||| || |||| || || ||||| ||||| || Sbjct 11334970 TATTTGCATTCCTCCTCTCAAACGAAGTACAAGGTGTAGGGTGGACTCTTTTTGAATGTT 11335029 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||| || | | ||| ||||| || || || || |||||||||||||| | ||| || || Sbjct 11335030 ATAATCGGCCAAAGTCCTACCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTG 11335089 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||||| || || || || || || || || ||||| || ||||| || | |||||| Sbjct 11335090 GTCAGGGGGGATACCCTCCTTGTCTTGGATTTTTGCCTTAACATTGTCAATGGTATCAGA 11335149 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || || || || || || || |||||||| || || ||||| |||||||| Sbjct 11335150 ACTCTCAACTTCAAGAGTTATGGTTTTTCCAGTAAGGGTCTTAACAAAGATCTGCAT 11335206 Score = 136 bits (150), Expect = 9e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||||||||| || || ||||||| | ||| | || || Sbjct 11333854 AAGAACAAGGTGCAGCGTGGATTCTTTCTGTATGTTGTAGTCAGCCAAAGTGCGGCCATC 11333913 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || |||||||||||||| || ||||||||||| |||||||| || ||||| || || Sbjct 11333914 CTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGTTGGTCAGGAGGAATGCCTTCCTTGTC 11333973 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| || ||||| || ||||| || | || || || | || || || || || || | Sbjct 11333974 CTGGATTTTTGCCTTGACATTGTCAATTGTGTC-TGAGCTCTCAACTTCAAGAGTGATTG 11334032 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | |||||||| | || || ||||| |||||||| Sbjct 11334033 TTTTACCAGTTAAGGTCTTCACAAAAATCTGCAT 11334066 Score = 132 bits (146), Expect = 1e-25 Identities = 172/237 (73%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| || || | | ||| || || |||| || || ||||||||||| || Sbjct 11481403 TATTTGCATTCCTCCCCTCAAACGAAGGACCAGGTGTAGGGTGGAATCTTTCTGAATGTT 11481344 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||| || | | ||| || || || || || || |||||||||||||| | ||| || || Sbjct 11481343 ATAATCGGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTG 11481284 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||||| || || || || || || || || || || || ||||| || | |||||| Sbjct 11481283 GTCAGGGGGGATACCCTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGA 11481224 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || ||||| || || || || || |||||||| || || ||||| |||||||| Sbjct 11481223 ACTCTCAACCTCGAGAGTTATTGTTTTTCCAGTAAGGGTCTTAACAAAGATCTGCAT 11481167 Score = 131 bits (144), Expect = 4e-25 Identities = 181/252 (72%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 104311 GTCTTTCCATACTTTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGAT 104368 |||||| || | ||||| ||||| ||||| |||| || || ||||| | || || Sbjct 11327161 GTCTTTACAAA---TATTTGCATTCCACCTCTCAGCCGGAGAACCAGATGAAGGGTGGAC 11327217 Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 ||||||||||| || || || | | || | ||| || || || ||||| |||||||| Sbjct 11327218 TCTTTCTGAATGTTGTAATCTGCCAAGGTCCGACCATCCTCAAGCTGTTTACCAGCAAAG 11327277 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || |||||||| || || || || ||||| || || || || || || || |||||||| Sbjct 11327278 ATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATTTTCGCCTTTACATTG 11327337 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | ||||| || || || || || || ||||| ||||| || ||| Sbjct 11327338 TCAATTGTGTCAGAACTCTCTACTTCAAGGGTGATGGTTTTTCCAGTGAGTGTCTTAACA 11327397 Query 104549 AATATCTGCATT 104560 || || |||||| Sbjct 11327398 AAGATTTGCATT 11327409 Score = 131 bits (144), Expect = 4e-25 Identities = 181/252 (72%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 104311 GTCTTTCCATACTTTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGAT 104368 |||||| || | ||||| ||||| ||||| |||| || || | ||| | || || Sbjct 11520080 GTCTTTACAAA---TATTTGCATTCCACCTCTCAGCCGGAGAACCAAATGAAGGGTGGAC 11520024 Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 ||||||||||| || || || | | || | ||| || || || ||||| |||||||| Sbjct 11520023 TCTTTCTGAATGTTGTAATCTGCCAAGGTCCGACCATCCTCAAGCTGTTTACCAGCAAAG 11519964 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || |||||||| || || || || ||||| || || || || || ||||| |||||||| Sbjct 11519963 ATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTG 11519904 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | ||||| || || || || || || ||||| ||||| || ||| Sbjct 11519903 TCAATCGTGTCAGAACTCTCTACTTCAAGGGTGATGGTTTTTCCAGTGAGTGTCTTAACA 11519844 Query 104549 AATATCTGCATT 104560 || || |||||| Sbjct 11519843 AAGATTTGCATT 11519832 Score = 129 bits (142), Expect = 1e-24 Identities = 159/215 (74%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| || ||||| || || |||| ||||| || || || Sbjct 11326968 AAGAACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAATCAGCCAGAGTCCTTCCATC 11327027 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || ||||| |||||||| || |||||||| ||||| || || || || || || || Sbjct 11327028 CTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTC 11327087 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || |||||||| || ||||| || | ||||| || | || || || || || || | Sbjct 11327088 TTGGATCTTTGCCTTCACATTGTCGATTGTATCAG-AGCTCTCCACTTCAAGAGTGATGG 11327146 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 |||| || || || || ||||||||||| |||||| Sbjct 11327147 TCTTCCCGGTCAGCGTCTTTACAAATATTTGCATT 11327181 Score = 129 bits (142), Expect = 1e-24 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || |||| || || | ||| || || | || || || Sbjct 11520485 GTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCCAACTGCTTCCCT 11520426 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| ||||| ||||| || || || || |||||||| || || || Sbjct 11520425 GCAAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCCTGAATTTTGGCCTTC 11520366 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| |||| ||| || || | || ||||||||||| || ||||| || || || || Sbjct 11520365 ACATTATCTATGGTGTCTG-AGCTCTCCACCTCTAGTGTGATCGTCTTTCCCGTCAGGGT 11520307 Query 104542 TTTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 11520306 CTTCACAAATATCTGCAT 11520289 Score = 120 bits (132), Expect = 7e-22 Identities = 157/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| || || || || || |||| ||||| || || || Sbjct 11520273 AAGAACCAGGTGAAGGGTGGATTCCTTTTGTATGTTGTAATCAGCCAGAGTCCTTCCATC 11520214 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || ||||| |||||||| || |||||||| ||||| || || || || || || || Sbjct 11520213 CTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTC 11520154 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || ||||| || || ||||| || | || || || | || ||||| || || || | Sbjct 11520153 TTGGATCTTCGCCTTCACATTGTCGATTGTGTCAG-AGCTCTCCACCTCAAGAGTGATGG 11520095 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 |||| || || || || ||||||||||| |||||| Sbjct 11520094 TCTTCCCGGTCAGCGTCTTTACAAATATTTGCATT 11520060 Score = 118 bits (130), Expect = 2e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 ||| || |||||||| || ||||| |||| | || | || || || || || || || Sbjct 11481820 TGTGGACTCTTTCTGGATGTTATAATCAGCCAATGTCCGGCCATCCTCAAGCTGCTTACC 11481761 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 |||||||| |||||||| || || || || || || || || ||||| || || ||||| Sbjct 11481760 TGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTTCGCTTT 11481701 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||| || | || || || || ||||| |||||||||||||| || Sbjct 11481700 AACATTATCGATGGTGTCTGAACTCTCAACTTCAAGGGTAATGGTCTTACCAGTAAGGGT 11481641 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 11481640 CTTCACAAAAATTTGCAT 11481623 >seq57 Length=24021853 Score = 145 bits (160), Expect = 2e-29 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||| || || || || || ||||| || || ||||| | || |||| |||||| Sbjct 5891117 AAGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTTCGACCGTC 5891058 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || ||||| || || || || |||||||| ||||| || || || || ||||| || Sbjct 5891057 TTCAAGCTGTTTCCCGGCGAATATCAGCCTCTGCTGATCCGGTGGGATGCCCTCTTTGTC 5890998 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || ||||| || || ||||| || | || ||| || | || |||||||| || || | Sbjct 5890997 TTGGATCTTGGCCTTGACATTATCGATCGTGTCGG-AGCTCTCAACCTCTAGGGTTATGG 5890939 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || ||||||||||| ||||| |||||||| Sbjct 5890938 TCTTTCCGGTAAGTGTTTTAACAAAGATCTGCAT 5890905 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || || || | ||||||| |||||||| || || || || Sbjct 5891785 GTTGACTCTTTCTGAATGTTGTAATCCGCGAGAGTTCGGCCGTCTTCCAGCTGCTTCCCC 5891726 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| |||||||| || || || || || || || |||||||| ||||| ||||| Sbjct 5891725 GCGAAAATCAGCCTCTGCTGGTCCGGTGGAATGCCCTCCTTATCCTGGATCTTAGCTTTC 5891666 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| ||| |||||||| ||||| ||||| || || || ||| Sbjct 5891665 ACGTTGTCAATGGTGTCGGAGCTTTCGACCTCTAGAGTAATTGTCTTTCCGGTTAGAGTT 5891606 Query 104543 TTTACAAATATCTGCATT 104560 || ||||| ||||||||| Sbjct 5891605 TTAACAAAAATCTGCATT 5891588 Score = 145 bits (160), Expect = 2e-29 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| |||| || || || || || ||||| || || ||||| | ||||||| |||||| Sbjct 5916090 AAGCACTAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTTCGACCGTC 5916031 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || || || || || ||||||||||| ||||| || || || || ||||| || Sbjct 5916030 TTCAAGCTGCTTCCCGGCGAATATTAGCCTCTGCTGATCCGGTGGGATGCCCTCTTTGTC 5915971 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || ||||| || || ||||| || | || || | || | || |||||||| || || | Sbjct 5915970 TTGGATCTTGGCCTTGACATTATCGATCGTGTC-CGAGCTCTCAACCTCTAGGGTTATCG 5915912 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || ||||| ||||| ||||| |||||||| Sbjct 5915911 TCTTTCCGGTAAGAGTTTTGACAAAGATCTGCAT 5915878 Score = 134 bits (148), Expect = 3e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| ||||| || || || | || |||| |||||||| || || ||||| Sbjct 5916758 GTTGACTCTTTTTGAATGTTGTAATCGGCGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCG 5916699 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| |||||||| || || || || || || || |||||||| ||||| ||||| Sbjct 5916698 GCGAAAATCAGCCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTGGATCTTCGCTTTC 5916639 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || | || ||||| || || || ||||| || || || || Sbjct 5916638 ACGTTGTCAATGGTGTCGG-AGCTCTCGACCTCCAGGGTGATGGTCTTTCCGGTGAGGGT 5916580 Query 104542 TTTTACAAATATCTGCAT 104559 ||||||||| |||||||| Sbjct 5916579 TTTTACAAAAATCTGCAT 5916562 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| || || |||| ||||||| || || || || || || || Sbjct 5916986 GTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTTCGCCCATCCTCAAGCTGCTTGCCG 5916927 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || ||||| || || || || || ||||| || ||||||||||| ||||| Sbjct 5916926 GCGAAAATCAGTCTCTGCTGGTCTGGTGGAATCCCTTCCTTGTCCTGAATCTTCGCTTTC 5916867 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| ||| ||||| || || || ||||| || || || ||| Sbjct 5916866 ACGTTGTCAATGGTGTCGGAGCTTTCGACCTCCAGGGTGATGGTCTTTCCGGTGAGGGTT 5916807 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 5916806 TTCACAAAAATCTGCAT 5916790 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || ||||| | || || || || ||| Sbjct 5917229 AGGACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCT 5917170 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || || || |||||||| ||||| || || || || || || ||| Sbjct 5917169 TCCAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCC 5917110 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||||||||| ||||| || | ||| ||| | || ||||| || || || ||| Sbjct 5917109 TGAATCTTTGCTTTGACATTGTCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTC 5917050 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || || || || ||||| Sbjct 5917049 TTTCCAGTCAGTGTCTTCACGAAGATTTGCAT 5917018 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| ||||| || || | || |||| || ||||| || || || || Sbjct 5891329 GTTGACTCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCTTCGAGCTGCTTGCCG 5891270 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || || || || || || || || ||||| ||||| ||||| Sbjct 5891269 GCAAAGATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGGATCTTGGCTTTA 5891210 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| ||| || || | ||||| ||||| || ||||| || Sbjct 5891209 ACATTGTCGATGGTGTCGGAGCTTTCGACTTCCAAAGTAATGGTCTTTCCTGTAAGAGTC 5891150 Query 104543 TTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 5891149 TTCACAAATATCTGCAT 5891133 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || ||||| | || || || || ||| Sbjct 5892028 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTCCTCCCATCT 5891969 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||| || || | ||||| ||||| || || || ||||| || ||| Sbjct 5891968 TCCAGCTGCTTCCCAGCGAAGATCAATCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCC 5891909 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||||||||| ||||| || | ||| ||| | || ||||| || || || ||| Sbjct 5891908 TGAATCTTTGCTTTCACATTATCAATGGTGTCGGAACTCTCCACCTCCAGCGTGATGGTC 5891849 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || || ||||| Sbjct 5891848 TTCCCAGTCAGAGTCTTCACGAAGATTTGCAT 5891817 Score = 118 bits (130), Expect = 2e-21 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| ||||| || || | || |||| || ||||| || || || || Sbjct 5916302 GTTGACTCTTTCTGGATATTGTAATCGGCAAGGGTTCGCCCATCTTCGAGCTGCTTGCCG 5916243 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || || || || || || || || ||||| ||||| ||||| Sbjct 5916242 GCAAAGATCAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGGATCTTGGCTTTA 5916183 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || || || | || || ||| ||| || || | ||||| ||||| || ||||| Sbjct 5916182 ACGTTGTCGATCGTGTCTGAGCT---TTCGACTTCCAAAGTAATGGTCTTTCCTGTAAGA 5916126 Query 104540 GTTTTTACAAATATCTGCAT 104559 ||||| |||||||||||||| Sbjct 5916125 GTTTTCACAAATATCTGCAT 5916106 Score = 111 bits (122), Expect = 4e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || || || | ||| || ||||| || || ||||| || | Sbjct 22348726 TTCCTCCCCTGAGCCTCAAAACAAGGTGAAGTGTGGACTCTTTTTGGATGTTATAATCTG 22348667 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||| | ||| ||||| |||||||| ||||||||||| | ||||| |||||||||| Sbjct 22348666 CAAGAGTGCGACCATCTTCCAGTTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAG 22348607 Query 104451 GTATTCCTTCTTTATCCTGAA 104471 | || ||||| || ||||||| Sbjct 22348606 GAATGCCTTCCTTGTCCTGAA 22348586 >seq23 Length=22385789 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | ||| |||| ||||| || || ||||||||| Sbjct 4579857 GTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCA 4579798 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || ||||| || ||||| ||||| || || Sbjct 4579797 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTG 4579738 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||| || | ||| || | ||| ||||||| || || ||||| || || || ||| Sbjct 4579737 GCATTGTCGATGGTGTCAGACGATTCAACCTCTAAGGTTATGGTCTTCCCCGTTAGGGTT 4579678 Query 104543 TTTACAAATATCTGCATTTTG 104563 || || || |||||||| ||| Sbjct 4579677 TTCACGAAGATCTGCATCTTG 4579657 >seq44 Length=22053297 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 ||||| || ||||| ||||| || || ||||| || | ||||||||| | ||| ||||| Sbjct 21450215 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTATCGCTGGATTCAACCTCG 21450274 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || ||||| ||||| || ||||| || || ||||||||||| Sbjct 21450275 AGGGTGATGGTCTTCCCAGTTAGGGTTTTCACGAAGATCTGCATTTT 21450321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151370267379156