Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq42 134 9e-27 seq3 114 9e-21 seq12 91.5 1e-13 seq51 87.8 1e-12 >seq42 Length=30274277 Score = 134 bits (148), Expect = 9e-27 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| |||||||| |||||| ||||| |||||||||| | | || | || || Sbjct 11326744 ACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGAGTCCGACCATCCTCC 11326803 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 || || || || ||||| || || | || ||||| | |||| ||||| |||||| | Sbjct 11326804 AACTGCTTCCCTGCAAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCCTGA 11326863 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 |||||| ||||||||| | | ||| ||| || ||||| |||| |||||| || || Sbjct 11326864 ATTTTTGCCTTCACATTATCTATAGTGTCTGAGCTCTCAACCTCTAGTGTAATTGTCTTT 11326923 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| ||| ||||| ||||||||||| Sbjct 11326924 CCCGTCAGGGTCTTCACAAATATCTGCAT 11326952 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || |||||||| |||| |||| || | || |||| || || || ||||| Sbjct 11334104 TCCTTCTGTATATTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAG 11334163 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 ||||| | || || |||| || | ||||| |||||| |||||| |||||||| Sbjct 11334164 ATTAGCCTCTGCTGGTCGGGTGGAATACCTTCCTTGTCCTGGATTTTTGCTTTCACATTG 11334223 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | || ||| ||| ||| |||||||| | || ||||||||||| || | ||| ||||| Sbjct 11334224 TCGATAGTGTCTGAACTCTCAACTTCAAGGGTGATAGTTTTACCAGTAAGGGTCTTCACA 11334283 Query 38307 AATATCTGCATG 38318 ||||| |||||| Sbjct 11334284 AATATTTGCATG 11334295 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||||||| | ||||| ||||| || |||||| || || ||||| || | | Sbjct 11334296 CCACCTCTCAAACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCC 11334355 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || | || || | ||||| || |||||||| || | || || || | ||| Sbjct 11334356 AATGTCCGACCATCTTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGGA 11334415 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| ||||| |||||||| | || || ||| ||| |||||| Sbjct 11334416 ATACCCTCCTTGTCCTGGATTTTAGCTTTCACATTATCGATGGTGTCTGAACTCTCAACT 11334475 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||||||||| || || | ||| ||||| || || |||||| Sbjct 11334476 TCAAGGGTAATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 11334523 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 || || || |||||||| |||| |||| || | || || | |||||||| ||||| Sbjct 11482497 TCTTTCTGTATATTGTAGTCAGCCAAAGTGCGGCCATCCTCAAGCTGTTTTCCAGCAAAG 11482438 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || || | ||||| || | || | |||||| |||||| ||||||| ||| ||||| Sbjct 11482437 ATCAGCCTCTGTTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATTTTTGCCTTGACATTG 11482378 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | || ||| || |||||||| | || || |||||||| || ||||| ||||| Sbjct 11482377 TCAATTGTGTCTGAGCTCTCAACTTCAAGAGTGATTGTTTTACCAGTTAAGGTCTTCACA 11482318 Query 38307 AATATCTGCAT 38317 ||||||||||| Sbjct 11482317 AATATCTGCAT 11482307 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| ||||||||| |||||| ||||| |||||||||| | || | || || Sbjct 11520497 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGACCATCCTCC 11520438 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 || || || || ||||| || || | || ||||| | |||| || || |||||| | Sbjct 11520437 AACTGCTTCCCTGCAAAGATCAGCCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCCTGA 11520378 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 ||||| ||||||||| | | || ||| || || || |||| ||| || || || Sbjct 11520377 ATTTTGGCCTTCACATTATCTATGGTGTCTGAGCTCTCCACCTCTAGTGTGATCGTCTTT 11520318 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| ||| ||||| ||||||||||| Sbjct 11520317 CCCGTCAGGGTCTTCACAAATATCTGCAT 11520289 Score = 109 bits (120), Expect = 4e-19 Identities = 167/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 38081 CCAATCATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATT 38140 |||| ||| |||||| | | || | || | |||||| || ||||| |||||||| Sbjct 11333603 CCAA-CATCACCACCACGGAGTCGAAGAACAAGATGAAGTGTAGATTCCTTCTGAATATT 11333661 Query 38141 GTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTG 38200 |||||| | ||| || | || |||| || ||||| |||||||| || | || || Sbjct 11333662 GTAATCTGCCAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAATATGAGCCTCTGCTG 11333721 Query 38201 ATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCC 38260 ||| | |||| || || ||||| ||| ||| ||||||||| | | || || Sbjct 11333722 ATCTGGAGGGATACCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCTATGGTGTCAGA 11333781 Query 38261 ACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || | ||| ||||||||||| |||| ||| ||||| ||||||||||| Sbjct 11333782 GCTCTCCACCTCAAGTGTGATAGTTTTACCTGTCAGGGTCTTCACAAATATCTGCAT 11333838 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||||||| | ||||| ||||| ||| ||| || || || || ||||||| | Sbjct 11481849 CCACCTCTCAAACGGAGAACCAAGTGAAGTGTGGACTCTTTCTGGATGTTATAATCAGCC 11481790 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || | || || | || || || ||||| || || | || || || | ||| Sbjct 11481789 AATGTCCGGCCATCCTCAAGCTGCTTACCTGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 11481730 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| ||||| || ||||| | || || ||| ||| |||||| Sbjct 11481729 ATGCCCTCCTTGTCCTGGATTTTCGCTTTAACATTATCGATGGTGTCTGAACTCTCAACT 11481670 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || ||||| || | ||| ||||| || || |||||| Sbjct 11481669 TCAAGGGTAATGGTCTTACCAGTAAGGGTCTTCACAAAAATTTGCATG 11481622 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||||||| | ||||| ||||| || ||||| || || |||||||| | | Sbjct 11482077 CCACCTCTCAAACGGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCGGCC 11482018 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || | || || | || || || |||||||| || | || || || | |||| Sbjct 11482017 AATGTCCGACCATCTTCGAGCTGCTTACCAGCAAATATGAGCCTCTGCTGGTCTGGGGGG 11481958 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| |||||| || || || | | || ||| ||| |||||| Sbjct 11481957 ATACCCTCCTTGTCCTGGATTTTTGCTTTAACGTTATCAATGGTGTCTGAACTCTCAACT 11481898 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||| |||||||| || || | ||| ||||| || || |||||| Sbjct 11481897 TCAAGTGTGATAGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 11481850 Score = 98.7 bits (108), Expect = 7e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||| || || ||||| |||| |||| || | || |||| || || || ||||| Sbjct 11482269 TCCTTCTGTATGTTGTAGTCAGCCAAAGTTCGACCATCTTCTAGCTGCTTACCAGCAAAG 11482210 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 ||||| | || || || | || | ||||| |||||| ||||||| |||||||| Sbjct 11482209 ATTAGCCTCTGCTGGTCAGGTGGAATACCTTCCTTGTCCTGAATTTTTGCTTTCACATTA 11482150 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | ||| ||| ||| || ||||| | || ||||||||||| || | ||| ||||| Sbjct 11482149 TCAATAGTGTCTGAACTCTCTACTTCAAGGGTGATAGTTTTACCAGTAAGGGTCTTCACA 11482090 Query 38307 AATATCTGCATG 38318 || || |||||| Sbjct 11482089 AAAATTTGCATG 11482078 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 ||| |||||| | | || | || | |||||| || ||||| ||||||||||||| Sbjct 11482766 CATCACCACCACGGAGTCGAAGAACAAGATGAAGTGTAGATTCCTTCTGAATATTGTAAT 11482707 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | ||| || | || |||| || ||||| ||||| || || | || ||||| | Sbjct 11482706 CTACCAAGGTCCGCCCATCCTCTAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGATCTG 11482647 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| ||| || ||||| ||| ||| ||||||||| | | || || || | Sbjct 11482646 GAGGGATGCCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCTATGGTGTCAGAGCTCT 11482587 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || |||| ||| || |||||||| |||| ||| ||||| || |||||||| Sbjct 11482586 CCACCTCTAGTGTGATCGTTTTACCTGTCAGGGTCTTCACAAAAATCTGCAT 11482535 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| |||| ||| | ||||||||||| ||| |||||| || |||||||||| || | Sbjct 11481621 CCACCCCTCAGACGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATATTGTAATGAGCC 11481562 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || | || || | || || || ||||| || || | || || || | || Sbjct 11481561 AATGTCCGGCCATCCTCCAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGA 11481502 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || ||| ||||||||| | |||||| ||| |||||| Sbjct 11481501 ATACCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCAGTTGTATCTGAACTCTCAACT 11481442 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||| || || || | || | ||||| || ||||| ||||| Sbjct 11481441 TCAAGTGTGATTGTCTTTCTAGTAAGCGTTTTGACAAATATTTGCAT 11481395 Score = 93.3 bits (102), Expect = 3e-14 Identities = 164/238 (69%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||||||||| | |||| || || ||| ||| || ||||| || |||| Sbjct 11327634 CATT-CCACCTCTCAAACGAAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTTATAAT 11327692 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | ||| | | || || | || ||||| ||||| || | | ||| || || | Sbjct 11327693 CTGCCAATGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAG 11327752 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| || || ||||| ||||| ||| ||||| | | ||||| ||||| Sbjct 11327753 GGGGGATACCCTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGAACTTT 11327812 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTA 38323 | ||||| | || ||||| || || || | |||||| || || |||||||| | ||| Sbjct 11327813 CCACTTCAAGGGTTATAGTCTTCCCAGTAAGGGTTTTAACAAAGATCTGCATCTGTTA 11327870 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||||||||| | || | || || ||| ||| |||||||| || |||| Sbjct 11334976 CATT-CCTCCTCTCAAACGAAGTACAAGGTGTAGGGTGGACTCTTTTTGAATGTTATAAT 11335034 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | |||| | | || || | || ||||| ||||| || | | ||| || || | Sbjct 11335035 CGGCCAAAGTCCTACCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAG 11335094 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| || || ||||| |||||| ||| ||||| | | ||||| ||| | Sbjct 11335095 GGGGGATACCCTCCTTGTCTTGGATTTTTGCCTTAACATTGTCAATGGTATCAGAACTCT 11335154 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| | || || ||||| || || | ||| || || || |||||||| Sbjct 11335155 CAACTTCAAGAGTTATGGTTTTTCCAGTAAGGGTCTTAACAAAGATCTGCAT 11335206 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||| ||||| ||| ||||||||||| |||||||||| || | | | | || || Sbjct 11326972 ACCAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAATCAGCCAGAGTCCTTCCATCCTCA 11327031 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||||| || ||||| || || | || ||||| | ||||| || || ||||| Sbjct 11327032 AGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGG 11327091 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || ||| ||||||||| | || ||||| || || ||||| | || || || || Sbjct 11327092 ATCTTTGCCTTCACATTGTCGATTGTATCAGAGCTCTCCACTTCAAGAGTGATGGTCTTC 11327151 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || |||| || || || ||||| ||||| Sbjct 11327152 CCGGTCAGCGTCTTTACAAATATTTGCAT 11327180 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||||||||| | |||| || || ||| ||| || ||||| || |||| Sbjct 11327406 CATT-CCACCTCTCAAACGGAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTTATAAT 11327464 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | |||| | | || || | || ||||| ||||| || | | ||| ||||| | Sbjct 11327465 CGGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCAG 11327524 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| ||||| ||||| ||||| ||| ||||| | | ||||| || | Sbjct 11327525 GGGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCAATCGTATCAGAGCTCT 11327584 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| | || || || || || || | || || || ||||| ||||| Sbjct 11327585 CAACTTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTAACAAATATTTGCAT 11327636 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||||||||| | |||| || || ||| ||| || ||||| || |||| Sbjct 11519835 CATT-CCACCTCTCAAACGGAGGACCAGGTGGAGTGTGGACTCTTTCTGAATGTTATAAT 11519777 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | |||| | | || || | || ||||| ||||| || | | ||| ||||| | Sbjct 11519776 CGGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCAG 11519717 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| ||||| ||||| ||||| ||| ||||| | | ||||| || | Sbjct 11519716 GGGGGATTCCTTCCTTGTCTTGGATTTTCGCCTTTACATTGTCAATCGTATCAGAGCTCT 11519657 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| | || || || || || || | || || || ||||| ||||| Sbjct 11519656 CAACTTCAAGGGTGATGGTCTTTCCAGTGAGTGTCTTAACAAATATTTGCAT 11519605 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||||| || | ||||||||||| ||| ||| || ||||| ||||||| Sbjct 11520063 CATT-CCACCTCTCAGCCGGAGAACCAAATGAAGGGTGGACTCTTTCTGAATGTTGTAAT 11520005 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | ||| || | || || | ||||| || ||||| || || | || || || | Sbjct 11520004 CTGCCAAGGTCCGACCATCCTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGGTCTG 11519945 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| || || ||||| |||||| ||| ||||| | | || || ||| | Sbjct 11519944 GGGGGATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTGTCAATCGTGTCAGAACTCT 11519885 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | || || ||||| || || | || || || || || ||||| Sbjct 11519884 CTACTTCAAGGGTGATGGTTTTTCCAGTGAGTGTCTTAACAAAGATTTGCAT 11519833 Score = 84.2 bits (92), Expect = 1e-11 Identities = 162/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||||||||| || | || | || || ||| ||| || ||||| || |||| Sbjct 11519607 CATT-CCACCTCTCAATCGAAGGACGAGGTGGAGTGTGGACTCTTTCTGAATGTTATAAT 11519549 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | |||| | | || || | || ||||| ||||| || | | ||| || || | Sbjct 11519548 CTGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCAG 11519489 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||||| || || ||||| ||||| ||| ||||| | | ||||| ||||| Sbjct 11519488 GGGGGATACCCTCCTTGTCTTGGATTTTCGCCTTAACATTGTCAATGGTATCAGAACTTT 11519429 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTA 38323 | ||||| | || ||||| || || || | ||| || || || |||||||| | ||| Sbjct 11519428 CCACTTCAAGGGTTATAGTCTTCCCAGTAAGGGTCTTAACAAAGATCTGCATCTGTTA 11519371 >seq3 Length=18779844 Score = 114 bits (126), Expect = 9e-21 Identities = 81/93 (87%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||| ||||||||||||||||||||||||||| | || || |||||| | Sbjct 18715311 AAGCCCGTTCCTTTGGCTGTGGTTTCGCTAGATAGTAGACAAGGACAGTGGGAATCTCAT 18715370 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 |||||| ||||||||| |||||||||||||||| Sbjct 18715371 TAATCCATTCATGCGCATCACTAATTAGATGAC 18715403 >seq12 Length=21026613 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||| | || | ||||| || || || |||||| || || ||||| |||| Sbjct 4557233 CCACCTCTGAGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCT 4557174 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || || ||||| ||||| |||||||| || || | || Sbjct 4557173 AGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAATATGAGGCGTTGCTGGTCCGGAGGA 4557114 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || || ||||||||| | || || || || || Sbjct 4557113 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCAGAGGACTCCACC 4557054 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | || || || |||||||| | |||||||||||| |||||||| || Sbjct 4557053 TCAAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 4557004 >seq51 Length=29360087 Score = 87.8 bits (96), Expect = 1e-12 Identities = 72/88 (82%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 ||| |||| |||||| |||||||| | ||||||||| | || || | ||| ||||| Sbjct 24725078 CCCTTTCCTTTGGCTATGGTTTCGTTGGATAGTAGACAAGGATAGTGGGATTCTTGTTAA 24725019 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATG 25987 ||| |||||||||||||||||||||||| Sbjct 24725018 TCCATTCATGCGCGTCACTAATTAGATG 24724991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334939415303717