Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq42 89.7 1e-12 >seq42 Length=30274277 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTC 243585 |||| || ||| | |||||||| | || ||| || | || |||||| || || Sbjct 25646867 GAAAGAGAGTTCGTCTGCGACGCGTTGCCGTGCGCTCTAGTGGGGATGAACAGTGCTCTA 25646808 Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645 ||| | || |||||||||||||| ||||| ||| | || ||| | ||||| | ||| Sbjct 25646807 ATGAGCCAATACATCGAATTCGTTGCCGATCGCCTGCTCGGCGCCTTGGGTTACGGGAAG 25646748 Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705 |||||||| ||| || || | || |||||||| || || | || || || || Sbjct 25646747 ATGTACAACGTTTCGAATCCGTTCGACTGGATGGAGCTAATCTCTTTACAGGGAAAGACC 25646688 Query 243706 AACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||||||||||| ||| | || | || ||||| Sbjct 25646687 AACTTCTTCGAGAAGAGGGTTGGGGAGTATCA 25646656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102853052850450