Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq42 111 2e-19 >seq42 Length=30274277 Score = 111 bits (122), Expect = 2e-19 Identities = 155/216 (72%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 119510 AAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCT 119569 ||||||| | || || ||||| | |||||| ||| | ||| |||||||| || | Sbjct 25646962 AAGCCCT-CGTCTCGCGAGATTAACTCATTTGAGAAAGTTAATCCCGGCATGAGACCGCG 25647020 Query 119570 TTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGC 119629 |||||||||||| || || | || || ||||| || ||||||||||| ||||| ||||| Sbjct 25647021 TTTCTTTAGCCAGAATATCGAGCAGAAGCTTCCGGAGAAGAAGATGCCTTCCACGCAGGC 25647080 Query 119630 GAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCCAGTT 119689 ||| |||| || || || ||||| | | || ||||| ||| ||||||||| | Sbjct 25647081 GAATGCGAGCAGGCGTTCGGCAAAGGTTTCGGAGCCGTCGATCCATCGGAGAGCCCACTG 25647140 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGC 119725 ||| || | ||| ||||||| || | ||| || Sbjct 25647141 GGCTTTCTTCGCTACACAGGGGATGGTATCGATTGC 25647176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961960284600