Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq1907 86.0 1e-11 seq1906 86.0 1e-11 >seq1907 Length=160928 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| | ||||||||||| Sbjct 33191 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 33133 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 33132 CCCCGTCAGTCC 33121 >seq1906 Length=773279 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| | ||||||||||| Sbjct 750201 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 750143 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 750142 CCCCGTCAGTCC 750131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777613463197200