Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq1907 563 3e-156 seq1906 563 3e-156 seq37 563 3e-156 seq11 401 2e-107 seq3 187 7e-43 seq57 80.6 8e-11 seq35 80.6 8e-11 >seq1907 Length=160928 Score = 563 bits (624), Expect = 3e-156 Identities = 706/961 (73%), Gaps = 8/961 (1%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| ||| || ||| || | Sbjct 1398 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCGAC-CTTATTGACCGCAAC 1340 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || |||||||| || || ||||| || |||||||| || || || Sbjct 1339 TTCTGTATTTATTATCGCCTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 1280 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 |||||| ||||| ||| || ||||||||||| || || || || ||| | | || | Sbjct 1279 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATTATTCCTAC 1220 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | ||| || || || | ||||| |||||||| |||||||| || |||||||| Sbjct 1219 TTCTGCA--GCTATAGGTTTGCACTTTTACCCAATATGGGAAGCAGCATCCGTTGATGAA 1162 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | ||||| || || || | | || | || | |||||| | |||| || | Sbjct 1161 TGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1102 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | || || || ||| | || |||||| | Sbjct 1101 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCT 1042 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | |||||||| | ||| Sbjct 1041 GTTGCATATTCAGCTCCTGTTGCAGCTGCTGCTGCTGTTTTCTTGATCTACCCAATTGGT 982 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || || || || || ||||||| |||| | Sbjct 981 CAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATT 922 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || ||||| || || || ||||| || |||||||| ||||||||| | ||||| ||||| Sbjct 921 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGCTGGT 862 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| || || ||||| ||||| ||||| ||||| | || || || | | ||| Sbjct 861 GTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGAT 803 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | ||| || ||||||| || || ||||| ||||| Sbjct 802 CAGGGAAACCACAGAAAATGAATCTGCTAATGCAGGTTACAGATTCGGTCAAGAGGAAGA 743 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 |||||||| || || || ||||| ||||| ||||| || |||||||||||||||||| Sbjct 742 AACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 683 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||||||| |||||| |||| |||||||| ||||| ||||| || ||||| || || Sbjct 682 TTTCAATAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 623 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 |||| |||| || || | || ||||| || || || || ||||| || || ||||| Sbjct 622 GTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCA 563 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | | |||||||| |||||||||||||||||| || |||| || || Sbjct 562 ATCTGTAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGC 503 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||| ||||| || ||||| || Sbjct 502 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 443 Query 29616 T 29616 | Sbjct 442 T 442 >seq1906 Length=773279 Score = 563 bits (624), Expect = 3e-156 Identities = 706/961 (73%), Gaps = 8/961 (1%) Strand=Plus/Plus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| ||| || ||| || | Sbjct 272161 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCGAC-CTTATTGACCGCAAC 272219 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || |||||||| || || ||||| || |||||||| || || || Sbjct 272220 TTCTGTATTTATTATCGCCTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 272279 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 |||||| ||||| ||| || ||||||||||| || || || || ||| | | || | Sbjct 272280 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATTATTCCTAC 272339 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | ||| || || || | ||||| |||||||| |||||||| || |||||||| Sbjct 272340 TTCTGCA--GCTATAGGTTTGCACTTTTACCCAATATGGGAAGCAGCATCCGTTGATGAA 272397 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | ||||| || || || | | || | || | |||||| | |||| || | Sbjct 272398 TGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 272457 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | || || || ||| | || |||||| | Sbjct 272458 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 272517 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | |||||||| | ||| Sbjct 272518 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGT 272577 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || || || || || ||||||| |||| | Sbjct 272578 CAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATT 272637 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || ||||| || || || ||||| || |||||||| ||||||||| | ||||| ||||| Sbjct 272638 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGCTGGT 272697 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| || || ||||| ||||| ||||| ||||| | || || || | | ||| Sbjct 272698 GTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGAT 272756 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | ||| || ||||||| || || ||||| ||||| Sbjct 272757 CAGGGAAACCACAGAAAATGAATCTGCTAATGCAGGTTACAGATTCGGTCAAGAGGAAGA 272816 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 |||||||| || || || ||||| ||||| ||||| || |||||||||||||||||| Sbjct 272817 AACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 272876 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||||||| |||||| |||| |||||||| ||||| ||||| || ||||| || || Sbjct 272877 TTTCAATAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 272936 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 |||| |||| || || | || ||||| || || || || ||||| || || ||||| Sbjct 272937 GTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCA 272996 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | | |||||||| |||||||||||||||||| || |||| || || Sbjct 272997 ATCTGTAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGC 273056 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||| ||||| || ||||| || Sbjct 273057 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 273116 Query 29616 T 29616 | Sbjct 273117 T 273117 >seq37 Length=24396255 Score = 563 bits (624), Expect = 3e-156 Identities = 706/961 (73%), Gaps = 8/961 (1%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| ||| || ||| || | Sbjct 3890182 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCGAC-CTTATTGACCGCAAC 3890124 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || |||||||| || || ||||| || |||||||| || || || Sbjct 3890123 TTCTGTATTTATTATCGCCTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 3890064 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 |||||| ||||| ||| || ||||||||||| || || || || ||| | | || | Sbjct 3890063 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATTATTCCTAC 3890004 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | ||| || || || | ||||| |||||||| |||||||| || |||||||| Sbjct 3890003 TTCTGCA--GCTATAGGTTTGCACTTTTACCCAATATGGGAAGCAGCATCCGTTGATGAA 3889946 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | ||||| || || || | | || | || | |||||| | |||| || | Sbjct 3889945 TGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 3889886 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | || || || ||| | || |||||| | Sbjct 3889885 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 3889826 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | |||||||| | ||| Sbjct 3889825 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGT 3889766 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || || || || || ||||||| |||| | Sbjct 3889765 CAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATT 3889706 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || ||||| || || || ||||| || |||||||| ||||||||| | ||||| ||||| Sbjct 3889705 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGCTGGT 3889646 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| || || ||||| ||||| ||||| ||||| | || || || | | ||| Sbjct 3889645 GTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGAT 3889587 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | ||| || ||||||| || || ||||| ||||| Sbjct 3889586 CAGGGAAACCACAGAAAATGAATCTGCTAATGCAGGTTACAGATTCGGTCAAGAGGAAGA 3889527 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 |||||||| || || || ||||| ||||| ||||| || |||||||||||||||||| Sbjct 3889526 AACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 3889467 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||||||| |||||| |||| |||||||| ||||| ||||| || ||||| || || Sbjct 3889466 TTTCAATAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 3889407 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 |||| |||| || || | || ||||| || || || || ||||| || || ||||| Sbjct 3889406 GTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCA 3889347 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | | |||||||| |||||||||||||||||| || |||| || || Sbjct 3889346 ATCTGTAGTTGATAGCCAAGGTCGTGTAATTAATACTTGGGCTGATATTATCAACCGTGC 3889287 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||| ||||| || ||||| || Sbjct 3889286 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 3889227 Query 29616 T 29616 | Sbjct 3889226 T 3889226 Score = 87.8 bits (96), Expect = 5e-13 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 29534 GGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTC 29593 |||||||| || |||| || |||||||| || | ||||| |||||||| |||||||||| Sbjct 3887727 GGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 3887668 Query 29594 ATAACTTCCCACTTGATCTGGCT 29616 |||| ||||| || ||||| ||| Sbjct 3887667 ATAATTTCCCTCTAGATCTAGCT 3887645 >seq11 Length=21508407 Score = 401 bits (444), Expect = 2e-107 Identities = 631/895 (71%), Gaps = 9/895 (1%) Strand=Plus/Plus Query 28726 TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTC 28785 || ||||| | |||||| | || || ||||| || |||||||| || || |||||| | Sbjct 13346742 TTTATTATCGTCTTCATTACTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCTATA 13346801 Query 28786 GCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAGCAGCAAT 28845 |||| ||| || ||||||||||| || || || || ||| | | || | | | || Sbjct 13346802 TTTGGATCTCTACTTTATGGAAACAATATTATCTCTGGTGCCATTATTCCTA-CTTCTAT 13346860 Query 28846 -GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTA 28904 || || || ||||||| |||||||| |||||||| | || ||||||||||| | || Sbjct 13346861 AGCTATAGGTTTACACTTTTACCCAATATGGGAAGCAACATCCGTTGATGAATGGTTATA 13346920 Query 28905 CAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACAT 28964 ||| || || || | | || | || | |||| | | |||| || | |||||| Sbjct 13346921 CAATGGTGGCCCTTATGAGCTAATTGTTCTACACTACTTACTTGGTGTAACTTTTTACAT 13346980 Query 28965 GGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATA 29024 ||| || |||||||||||||| | | ||||| ||| | |||||| ||| ||||| Sbjct 13346981 GGGTCGTGAGTGGGAACTTAGTTTCCATCTAGGTATGCACCATTGGATTGTTGTTGCATA 13347040 Query 29025 CTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTC 29084 | |||||| | ||||| | ||| |||||| | |||||||| | ||| |||| Sbjct 13347041 TTTAGCTCCTATTGCAGCTACTACTGTTGTTTTCTTAATCTACCCAATTGGTTAAGGAAG 13347100 Query 29085 TTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCA 29144 ||| || | |||||| | || || || || || ||||||| |||| | || ||| | Sbjct 13347101 CTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTA 13347160 Query 29145 AGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGG 29204 || || || ||||| | |||||| | ||||||||| | ||| | | ||| || || || Sbjct 13347161 GGCTGAGCACAACATCTTTATGCACTCATTCCACATG-TTGGCATAGTTGGTGTATTTGG 13347219 Query 29205 TGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGCGTGAGA 29263 ||| || ||||| |||| ||||| ||||| ||| || || | ||| | | || | Sbjct 13347220 TGGTTCCCTATTCAGTGTTATGCATGGTTC-ATTGGTACCCTCTAGTTTGATTAGGGAAA 13347278 Query 29264 CGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATA 29323 | | ||| | ||| ||| ||||||| ||||| ||||| ||||| ||||||| Sbjct 13347279 CCATAGAAAATGAATCTGCGAATGTAGGTTACACATTTGGTCAAGATGAAGAAACTTATA 13347338 Query 29324 ACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATA 29383 | || | | ||||| ||||| ||||| | ||||| |||||||||||| ||||||| Sbjct 13347339 ATATTGCGACTGCTCATGGTTATTTTGGTTGATTGATTTTCCAATATGCTATATTCAATA 13347398 Query 29384 ATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTG 29443 || |||||| |||| |||||||| ||||| ||||| | ||||| || |||||| || Sbjct 13347399 ATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTATAGTAGGTATCTGGTTCATTG 13347458 Query 29444 CCTTGGGCGTTTCTACA--ATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCT 29501 | || | || || ||| || | || | || || ||||| || || ||||| || | Sbjct 13347459 CTTTAG--GTATCAACACTCTGACTTTCTACCTAAATGGTTTCAATTTCAACCAATCTAT 13347516 Query 29502 TCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCT 29561 | || | | | ||| |||| |||||||||| |||| || | | ||| | |||||||| Sbjct 13347517 AGTTGATAGCCAAGGTTGTGTAATTAATACTTAGGCTAATATCATAAATTGTGCTAACCT 13347576 Query 29562 CGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 || ||||| |||||||| |||||||||||||| ||||| | ||||| ||| Sbjct 13347577 TGGTACGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTTTAGATCTAGCT 13347631 >seq3 Length=18779844 Score = 187 bits (206), Expect = 7e-43 Identities = 196/258 (76%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 29361 CTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCC 29420 ||||||||||||| ||||||| || |||||| |||| |||||||| |||| ||||| Sbjct 15205084 CTTCCAATATGCTAGTTTCAATCATTCTCGTTCTTTACATTTCTTCCTAACTGCTTGGCC 15205025 Query 29421 GGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGG 29480 | ||||| || |||||| |||| || || | || ||||| || || || || || Sbjct 15205024 TATAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGG 15204965 Query 29481 TTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGA 29540 ||| || || ||||| || | | || | | | ||||||| ||||||||||||| ||| Sbjct 15204964 TTTCAATTTCAACCAATCTGTAGTTGATAGCCAAAGTCGTGTAATTAATACTTGGGTTGA 15204905 Query 29541 TGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTT 29600 | || |||| || |||||||| || | ||||| |||||||| || ||||||||||| || Sbjct 15204904 TATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGCAATGCTCATAATTT 15204845 Query 29601 CCCACTTGATCTGGCTAC 29618 ||| || ||||| ||||| Sbjct 15204844 CCCTCTAGATCTAGCTAC 15204827 Score = 96.9 bits (106), Expect = 1e-15 Identities = 102/133 (77%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 29107 GGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATG 29166 || || || || |||||||||| ||| | || ||||| || || || ||||| || ||| Sbjct 8573016 GGAATCTCTGGTACCTTCAACTTCATTATTGTATTCCAGGCTGAGCACAACATCCTTATG 8573075 Query 29167 CACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATG 29226 ||||| ||||||||| | ||| | | ||| || |||| || || ||||| |||| ||| Sbjct 8573076 CACCCATTCCACATGTTAGGCTTAGTTGGTGTATTCGACGGTTCCCTATTCAGTGTTATG 8573135 Query 29227 CACGGTTCGCTTG 29239 |||||||| |||| Sbjct 8573136 CACGGTTC-CTTG 8573147 >seq57 Length=24021853 Score = 80.6 bits (88), Expect = 8e-11 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 29337 TCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCT 29396 ||| ||||| ||||| | |||||||||||||||||| |||||||||| ||||| | Sbjct 6995755 TCATGGTTATTTTGGCCAATTGATCTTCCAATATGCTAGTTTCAATAATTCTTGTTCTTT 6995696 Query 29397 ACACTTCTTCCTTGCTGCCTGGCC 29420 || |||||||| ||||| ||||| Sbjct 6995695 GCATTTCTTCCTAGCTGCTTGGCC 6995672 >seq35 Length=22702307 Score = 80.6 bits (88), Expect = 8e-11 Identities = 115/162 (71%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 28868 CAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTG 28927 |||| |||||||| || ||||||||||| | ||||| || || || | | || Sbjct 3187974 CAATATGGGAAGCAGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAA 3187915 Query 28928 TGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCT 28987 | || | |||||| | |||| || | ||||||||| || |||||||||||||| | Sbjct 3187914 TTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTT 3187855 Query 28988 ATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAG 29029 || || || ||| | || |||||| ||| ||||| |||| Sbjct 3187854 TCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAG 3187813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146662278665822