Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq42 82.4 6e-11 >seq42 Length=30274277 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || || | ||||| || || || ||| | ||| ||| Sbjct 11482079 ATGCAAATTTTTGTGAAGACCCTTACTGGTAAAACTATCACCCTTGAAGTAGAGAGTTCA 11482138 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | |||||| ||||||| ||||| ||||| | || ||| || Sbjct 11482139 GACACTATTGATAATGTGAAAGCAAAAATTCAGGACAAGGAAGGTATTCCACCTGACCAG 11482198 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| || | ||| || || || |||||||| | |||| ||| || |||||| Sbjct 11482199 CAGAGGCTAATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGAACTTTGGCTGACTACAAC 11482258 Query 106440 ATACAAAAAGAATCTACACTACA 106462 ||||| || ||||| || || || Sbjct 11482259 ATACAGAAGGAATCAACCCTTCA 11482281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402320249231456