Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq35 84.2 1e-11 >seq35 Length=22702307 Score = 84.2 bits (92), Expect = 1e-11 Identities = 223/333 (67%), Gaps = 11/333 (3%) Strand=Plus/Plus Query 64913 CCATTTATTAAAATCATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATGAGACCA 64972 ||||| | || || ||| ||||||||||| |||| | | || |||| | | ||| Sbjct 13803126 CCATTGACTAGAACCATTGGAATAATTGGGACATACCAAGTGGGTTCAATAGATTGTCCA 13803185 Query 64973 TCATCATCCAAATACTTCAAAATGGCATCATCCTCTTTTGGAAATATAGAACGAGTTATT 65032 || |||| || || | || | | | ||||| || ||||| || | | || || ||| Sbjct 13803186 TCTTCATTTAAGTAGTCTAATAGGACGTCATCATCCTTTGGGAACAGGAACCGTGTGATT 13803245 Query 65033 TTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTT----GTCCAGTTCGTCG 65088 | | | |||| || || || ||| | ||| || |||| || | | | | Sbjct 13803246 GGAGAAAGTCGAGTGTATATGTACCTTGCACTTGCATGATCTTTCCCCCCCTGAT-GAGG 13803304 Query 65089 TGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTG 65148 |||||||| ||||||||||| | | | || || ||||| || | ||| | ||| Sbjct 13803305 AGTTCCAAATTGACCATTTGGTAGAAGAAGGTTTATGTTGTTGCTGCCCACAAAGTCCTG 13803364 Query 65149 AGCCATTCCGATAAT--TGCT-GCATTTAAACTCGCTTCACCGTGATGATATCCTGAATG 65205 ||||| || ||||| |||| ||| || ||| || ||||| ||||| || | ||||| Sbjct 13803365 TGCCATGCCAATAATGGTGCTAGCA-ATAGACT-GC-TCACCATGATGGTAAGCGGAATG 13803421 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTT 65238 ||||| ||||| ||| ||| ||||||| ||| Sbjct 13803422 CTCAGACACATAACCAGAAAACTGAGCAATTTT 13803454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235674522428550