Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq1907 89.7 2e-13 seq32 86.0 2e-12 >seq1907 Length=160928 Score = 89.7 bits (98), Expect = 2e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 21135 CCCACCCTTTCAAGTCGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGG 21194 |||| | |||| | ||| |||||||||| |||||||||| ||||||||||| |||| Sbjct 40414 CCCATCTCTTCAGGGCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGG 40355 Query 21195 TCGCAGGTTCGAATCCTGTCTCCGCAA 21221 || | ||||| |||||||||||||||| Sbjct 40354 TCACGGGTTCAAATCCTGTCTCCGCAA 40328 >seq32 Length=19818926 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 12560478 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 12560419 Query 21210 CTGTCTCCGCAA 21221 |||||||||||| Sbjct 12560418 CTGTCTCCGCAA 12560407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162521119524326