Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07] 1,907 sequences; 486,196,837 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq42 116 3e-21 seq57 104 2e-17 seq49 98.7 7e-16 >seq42 Length=30274277 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || || ||||| |||||||| |||||||| | | Sbjct 11334066 ATGCAGATTTTTGTGAAGACCTTAACTGGTAAAACAATCACTCTTGAAGTTGAGAGCTCA 11334007 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || |||||| | ||||| ||||| | || || || || Sbjct 11334006 GACACAATTGACAATGTCAAGGCAAAAA-TCCAGGACAAGGAAGGCATTCCTCCTGACCA 11333948 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| || ||||| || || || | |||||||| | || ||||| Sbjct 11333947 ACAGAGGCTGATCTTTGCTGGAAAACAGCTTGAGGATGGCCGCACTTTGGCTGACTACAA 11333888 Query 23790 CATACAAAAAGAGTCCAC 23807 |||||| ||||| ||||| Sbjct 11333887 CATACAGAAAGAATCCAC 11333870 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || |||||||| |||||||| ||||| || |||||||| | Sbjct 11481851 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACACTTGAAGTTGAGAGTTCA 11481910 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || ||||| |||||| | ||||| || ||| | || ||||| || Sbjct 11481911 GACACCATTGATAACGTTAAAGCAAAAA-TCCAGGACAAGGAGGGTATCCCCCCAGACCA 11481969 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | |||||||| || || || || ||||| | || || || | ||||||||| Sbjct 11481970 GCAGAGGCTCATATTTGCTGGTAAGCAGCTCGAAGATGGTCGGACATTGGCCGATTACAA 11482029 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || | || || ||| | | ||| |||| || Sbjct 11482030 CATCCAGAAGGAATCAACCCTTCACTTGGTTCTCCGTTTGAGAGGTGG 11482077 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || |||||||| |||||||| ||||| || |||||||| | | Sbjct 11334750 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACCCTTGAAGTTGAGAGCTCA 11334691 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | |||| | ||||| || ||| | || ||||| || Sbjct 11334690 GACACCATTGATAATGTCAAAGCGAAAA-TCCAGGACAAGGAGGGTATTCCCCCAGACCA 11334632 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | |||||||| || || || || || || | || || || | ||||| || Sbjct 11334631 GCAGAGGCTTATATTTGCTGGTAAGCAGCTCGAGGATGGCCGGACATTGGCTGATTATAA 11334572 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || ||||||||||| | || || ||| Sbjct 11334571 CATCCAGAAAGAGTCCACCCTTCACTTGGTT 11334541 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| ||||| || |||||||| || ||||| |||||||| | Sbjct 11335206 ATGCAGATCTTTGTTAAGACCCTTACTGGAAAAACCATAACTCTTGAAGTTGAGAGTTCT 11335147 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| |||| |||||| | ||||| || ||| | || || || || Sbjct 11335146 GATACCATTGACAATGTTAAGGCAAAAA-TCCAAGACAAGGAGGGTATCCCCCCTGACCA 11335088 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| || || || || || || | | ||||| | |||||| || Sbjct 11335087 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGTAGGACTTTGGCCGATTATAA 11335028 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| |||||||||||||| |||| | || | | ||| |||||||| Sbjct 11335027 CATTCAAAAAGAGTCCACCCTACACCTTGTACTTCGTTTGAGAGGAGGA 11334979 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| || ||||| |||||||| ||||| || ||||| || | Sbjct 11519832 AATGCAAATCTTTGTTAAGACACTCACTGGAAAAACCATCACCCTTGAAGTAGAGAGTTC 11519891 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| | |||| |||||| ||||| || || | || ||||| || Sbjct 11519892 TGACACGATTGACAATGTAAAGGCAAAAATCCAAGACAAGGAGGGAATCCCCCCAGACCA 11519951 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || ||||| || || || | || || || | |||||||| Sbjct 11519952 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGGACCTTGGCAGATTACAA 11520011 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || ||||||||||| | ||||| ||| | || || |||| ||| Sbjct 11520012 CATTCAGAAAGAGTCCACCCTTCATTTGGTTCTCCGGCTGAGAGGTGGA 11520060 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||||| || || ||||| ||||| || ||||| || | Sbjct 11482079 ATGCAAATTTTTGTGAAGACCCTTACTGGTAAAACTATCACCCTTGAAGTAGAGAGTTCA 11482138 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | ||| |||||| || ||||| |||||| | || || || || Sbjct 11482139 GACACTATTGATAATGTGAAAGCAAAAA-TTCAGGACAAGGAAGGTATTCCACCTGACCA 11482197 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | |||| ||||| || || || || ||||| | || ||||| | || ||||| Sbjct 11482198 GCAGAGGCTAATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGAACTTTGGCTGACTACAA 11482257 Query 23790 CATACAAAAAGAGTCCAC 23807 |||||| || || || || Sbjct 11482258 CATACAGAAGGAATCAAC 11482275 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| || ||||| |||||||| ||||| || ||||| || | Sbjct 11327409 AATGCAAATCTTTGTTAAGACACTCACTGGAAAAACCATCACCCTTGAAGTAGAGAGTTC 11327350 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| | |||| ||||| ||||| || || | || ||||| || Sbjct 11327349 TGACACAATTGACAATGTAAAGGCGAAAATCCAAGACAAGGAGGGAATCCCCCCAGACCA 11327290 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || ||||| || || || | || || || | |||||||| Sbjct 11327289 GCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGTCGGACCTTGGCAGATTACAA 11327230 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || ||||||||||| | ||| | ||| | || || |||| ||| Sbjct 11327229 CATTCAGAAAGAGTCCACCCTTCATCTGGTTCTCCGGCTGAGAGGTGGA 11327181 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| |||||||| || || || || || ||||| | | Sbjct 11326952 ATGCAGATATTTGTGAAGACCCTGACGGGAAAGACAATTACACTAGAGGTTGAGAGCTCA 11326893 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || |||||| || ||||| ||||| | || |||||||| Sbjct 11326892 GACACTATAGATAATGTGAAGGCAAAAA-TTCAGGACAAGGAAGGGATCCCTCCAGATCA 11326834 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || |||| || | || ||| | | |||||||| Sbjct 11326833 GCAGAGGCTCATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACTCTTGCTGATTACAA 11326774 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 11326773 CATTCAGAAGGAGTCTACTCTTCACTTGGTT 11326743 Score = 98.7 bits (108), Expect = 7e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| || ||||| ||||| || ||||| || |||||||| | | Sbjct 11327637 AATGCAAATATTTGTTAAGACACTCACTGGAAAGACCATCACCCTTGAAGTTGAGAGCTC 11327578 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| | |||| ||||| ||||| ||||| | || || ||||| Sbjct 11327577 TGATACGATTGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGATCA 11327518 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| || || || || || || | | ||||| | |||||| || Sbjct 11327517 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCCGATTATAA 11327458 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || |||||||||||| Sbjct 11327457 CATTCAGAAAGAGTCCACA 11327439 Score = 98.7 bits (108), Expect = 7e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || ||||| || ||||| ||||| || ||||| || |||||||| | | Sbjct 11519604 AATGCAAATATTTGTTAAGACACTCACTGGAAAGACCATCACCCTTGAAGTTGAGAGCTC 11519663 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| | |||| ||||| ||||| ||||| | || || ||||| Sbjct 11519664 TGATACGATTGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGATCA 11519723 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| || || || || || || | | ||||| | |||||| || Sbjct 11519724 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCCGATTATAA 11519783 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || |||||||||||| Sbjct 11519784 CATTCAGAAAGAGTCCACA 11519802 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||||| || || || || || || || |||||||| | Sbjct 11481623 ATGCAAATTTTTGTGAAGACCCTTACTGGTAAGACCATTACCCTTGAAGTTGAGAGTTCA 11481682 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| ||||| | |||| | ||||| || || | || ||||| || Sbjct 11481683 GACACCATCGATAATGTTAAAGCGAAAA-TCCAGGACAAGGAGGGCATTCCCCCAGACCA 11481741 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || || || | || || || | ||||| || Sbjct 11481742 GCAGAGGCTCATTTTTGCAGGTAAGCAGCTTGAGGATGGCCGGACATTGGCTGATTATAA 11481801 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || |||||||||||| | || || ||| | | ||| |||| || Sbjct 11481802 CATCCAGAAAGAGTCCACACTTCACTTGGTTCTCCGTTTGAGAGGTGG 11481849 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| |||||||| |||||||| || || || || | | Sbjct 11520289 ATGCAGATATTTGTGAAGACCCTGACGGGAAAGACGATCACACTAGAGGTGGAGAGCTCA 11520348 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | |||| || ||||| || || | || |||||||| Sbjct 11520349 GACACCATAGATAATGTGAAGGCCAAAA-TTCAGGACAAGGAGGGGATCCCTCCAGATCA 11520407 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || |||| || | || || | | |||||||| Sbjct 11520408 GCAGAGGCTGATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACACTTGCTGATTACAA 11520467 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 11520468 CATTCAGAAGGAGTCCAC 11520485 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || ||||||||||| || || || || | | Sbjct 11482535 ATGCAGATTTTTGTGAAGACCCTGACAGGTAAAACGATCACACTAGAGGTGGAGAGCTCT 11482594 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | ||| ||| ||||| || || | || |||||||| Sbjct 11482595 GACACCATAGATAATGTGAAGGC-AAAGATTCAAGACAAGGAGGGCATCCCTCCAGATCA 11482653 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || || || | || || || | |||||||| Sbjct 11482654 GCAGAGGCTCATCTTTGCTGGAAAGCAGCTAGAGGATGGGCGGACCTTGGTAGATTACAA 11482713 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || || || ||| | ||| | ||| Sbjct 11482714 TATTCAGAAGGAATCTACACTTCATCTTGTT 11482744 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || || || || || || || || |||||||| ||||| || | | Sbjct 11327181 AATGCAAATATTTGTAAAGACGCTGACCGGGAAGACCATCACTCTTGAAGTGGAGAGCTC 11327122 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || | || ||| | || |||| | | ||||| || ||| | || ||||||| Sbjct 11327121 TGATACAATCGACAATGTGAAGGCAAAGA-TCCAAGACAAGGAGGGTATCCCCCCAGATC 11327063 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || ||||| || || || | | | ||| | | ||||||| Sbjct 11327062 AGCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACA 11327003 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| ||||| || ||||| Sbjct 11327002 ACATTCAAAAGGAATCCAC 11326984 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || || || || || || || || |||||||| || || || | | Sbjct 11520060 AATGCAAATATTTGTAAAGACGCTGACCGGGAAGACCATCACTCTTGAGGTGGAGAGCTC 11520119 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | || | || | | ||||| || ||| | || ||||||| Sbjct 11520120 TGACACAATCGACAATGTGAAGGCGAAGA-TCCAAGACAAGGAGGGTATCCCCCCAGATC 11520178 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || ||||| || || || | | | ||| | | ||||||| Sbjct 11520179 AGCAGAGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACA 11520238 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||||||||| || ||||| Sbjct 11520239 ACATACAAAAGGAATCCAC 11520257 >seq57 Length=24021853 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||||||||| ||||| || ||||| || || || || | | Sbjct 5916562 ATGCAGATTTTTGTAAAAACCCTCACCGGAAAGACCATCACCCTGGAGGTCGAGAGCTCC 5916621 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || || || || || || | || ||||| || Sbjct 5916622 GACACCATTGACAACGTGAAAGCGAAGATCCAGGATAAGGAGGGCATTCCACCAGACCAG 5916681 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| || || |||||||||| || || | | |||||||||| Sbjct 5916682 CAGAGGCTGATTTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCGCCGATTACAAC 5916741 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||||||||| || Sbjct 5916742 ATTCAAAAAGAGTCAAC 5916758 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||| ||||| | || || ||||| ||| | || || ||||| ||||||||||||||| Sbjct 22348591 GACAAGGAAGGCATTCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAACTGGAA 22348650 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | |||||| | | ||||| ||||| ||||||||||||||| | || | ||||| Sbjct 22348651 GATGGTCGCACTCTTGCAGATTATAACATCCAAAAAGAGTCCACACTTCACCTTGTTTTG 22348710 Query 23824 AGGTTGCGAGGAGGA 23838 ||| | | |||||| Sbjct 22348711 AGGCTCAGGGGAGGA 22348725 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||||||||| ||||| || ||||| || || || || | | Sbjct 5916790 ATGCAGATTTTTGTGAAAACCCTCACCGGAAAGACCATCACCCTGGAGGTCGAAAGCTCC 5916849 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || ||| ||||| ||||| | || ||||| || Sbjct 5916850 GACACCATTGACAACGTGAAAGCGAAGATTCAGGACAAGGAAGGGATTCCACCAGACCAG 5916909 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || |||||||| || || || || | || ||| | | ||||||||| Sbjct 5916910 CAGAGACTGATTTTCGCCGGCAAGCAGCTTGAGGATGGGCGAACTCTTGCTGATTACAAC 5916969 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 5916970 ATTCAGAAGGAGTCTAC 5916986 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| |||||||| || || ||||| || || ||||| || || || | | Sbjct 5891588 AATGCAGATTTTTGTTAAAACTCTAACCGGAAAGACAATTACTCTAGAGGTCGAAAGCTC 5891647 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| | | ||| || || || || || || | || || || || Sbjct 5891648 CGACACCATTGACAACGTGAAAGCTAAGATCCAGGATAAGGAGGGCATTCCACCGGACCA 5891707 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || || || |||||||||| || ||| | | |||||||| Sbjct 5891708 GCAGAGGCTGATTTTCGCGGGGAAGCAGCTGGAAGACGGCCGAACTCTCGCGGATTACAA 5891767 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 5891768 CATTCAGAAAGAGTCAAC 5891785 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || ||||| || || ||| | ||||| || | | Sbjct 5891133 ATGCAGATATTTGTGAAGACTCTTACAGGAAAGACCATTACTTTGGAAGTCGAAAGCTCC 5891192 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| ||||| | || | | ||||| || ||| | || || || || Sbjct 5891193 GACACCATCGACAATGTTAAAGCCAAGA-TCCAGGACAAGGAGGGTATTCCACCGGACCA 5891251 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | || || | | ||||||||| Sbjct 5891252 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGAACCCTTGCCGATTACAA 5891311 Query 23790 CATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 5891312 TATCCAGAAAGAGTCAAC 5891329 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || ||||| || || ||| | ||||| || | | Sbjct 5916106 ATGCAGATATTTGTGAAAACTCTTACAGGAAAGACCATTACTTTGGAAGTCGAAAGCTCA 5916165 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | ||||| || ||| | || || || || Sbjct 5916166 GACACGATCGACAACGTTAAAGCCAAGA-TCCAGGACAAGGAGGGTATTCCACCGGACCA 5916224 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| || || ||||| | || || | | ||||||||| Sbjct 5916225 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGAACCCTTGCCGATTACAA 5916284 Query 23790 CATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 5916285 TATCCAGAAAGAGTCAAC 5916302 >seq49 Length=17126926 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||| ||||| || || || || || || ||||| || Sbjct 13269705 AAGATGCAGATTTTCGTGAAGACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCA 13269764 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || || ||||| ||||| | ||||| || Sbjct 13269765 TCTGACACGATCGATAATGTCAAGGC-CAAGATCCAAGACAAGGAAGGCATCCCGCCGGA 13269823 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || || |||||||| ||||| |||| || || ||| ||| || Sbjct 13269824 CCAGCAGCGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTA 13269883 Query 23787 CAACATACAAAAAGAGTCCAC 23807 ||| || || || ||||| || Sbjct 13269884 CAATATCCAGAAGGAGTCAAC 13269904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338001744128756