Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vitis_20vinifera_20[refseq_20GCF_5F000003745.3_202009-12-07]
1,907 sequences; 486,196,837 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq57 183 7e-41
seq42 168 2e-36
seq12 156 1e-32
seq23 147 5e-30
seq49 141 2e-28
seq44 84.2 5e-11
>seq57
Length=24021853
Score = 183 bits (202), Expect = 7e-41
Identities = 164/206 (80%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || || || ||||| || ||||| || |||||||| || || |||
Sbjct 5917021 CAAATCTTCGTGAAGACACTGACTGGAAAGACCATCACGCTGGAGGTGGAGAGTTCCGAC 5917080
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || |||||| ||||||||||||||| || || ||||| ||||| |||||
Sbjct 5917081 ACCATTGACAATGTCAAAGCAAAGATTCAGGACAAGGAGGGGATCCCACCGGATCAGCAG 5917140
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||||||||| || ||||| |||||||| ||||| || || || || ||| ||
Sbjct 5917141 AGGCTGATCTTCGCCGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAACATC 5917200
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||||||
Sbjct 5917201 CAGAAGGAGTCGACCCTCCATCTTGT 5917226
Score = 178 bits (196), Expect = 3e-39
Identities = 163/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| ||||| || || || || ||||| || |||||||| || || |||
Sbjct 5891820 CAAATCTTCGTGAAGACTCTGACTGGGAAGACCATCACGCTGGAGGTGGAGAGTTCCGAC 5891879
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| ||||||||||||||| ||||| ||||| ||||| |||||
Sbjct 5891880 ACCATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAAGGGATCCCACCGGATCAGCAG 5891939
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || ||||| |||||||| ||||| || || || || ||| ||
Sbjct 5891940 AGATTGATCTTCGCTGGGAAGCAGCTGGAAGATGGGAGGACCCTGGCGGACTACAACATC 5891999
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||||||
Sbjct 5892000 CAGAAGGAGTCCACCCTCCATCTTGT 5892025
Score = 178 bits (196), Expect = 3e-39
Identities = 163/205 (80%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| |||||||| ||||| ||||| || |||||||| ||||| |||||||| |||
Sbjct 5916793 CAGATTTTTGTGAAAACCCTCACCGGAAAGACCATCACCCTGGAGGTCGAAAGCTCCGAC 5916852
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| ||| |||||||||||||| ||||| || || || ||||||||
Sbjct 5916853 ACCATTGACAACGTGAAAGCGAAGATTCAGGACAAGGAAGGGATTCCACCAGACCAGCAG 5916912
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || |||||||| || ||||| || ||||| | |||||||| ||||| ||| |
Sbjct 5916913 AGACTGATTTTCGCCGGCAAGCAGCTTGAGGATGGGCGAACTCTTGCTGATTACAACATT 5916972
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 5916973 CAGAAGGAGTCTACCCTCCA-CTTG 5916996
Score = 172 bits (190), Expect = 1e-37
Identities = 162/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||||||||| |||||||| || || || | || || ||||||||||||
Sbjct 5916109 CAGATATTTGTGAAAACTCTTACAGGAAAGACCATTACTTTGGAAGTCGAAAGCTCAGAC 5916168
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| ||| ||||| |||||||| || || || || |||||||||||
Sbjct 5916169 ACGATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAGGGTATTCCACCGGACCAGCAG 5916228
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| ||||| || |||||||||||||| | || ||||||||||| || ||
Sbjct 5916229 AGGCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGAACCCTTGCCGATTACAATATC 5916288
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| ||||| || || ||||
Sbjct 5916289 CAGAAAGAGTCAACTCTTCA-CTTG 5916312
Score = 168 bits (186), Expect = 2e-36
Identities = 161/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| |||||||| ||||| ||||| || |||||||| ||||| |||||||| |||
Sbjct 5891364 CAGATTTTTGTGAAAACCCTCACCGGAAAGACCATCACCCTGGAGGTCGAAAGCTCCGAC 5891423
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || ||||| |||||||| || || || || |||||||||||
Sbjct 5891424 ACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACCAGCAG 5891483
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || |||||||| || || ||||| |||||||| | || || || || || ||| ||
Sbjct 5891484 AGGCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGCCGAACCCTCGCTGACTACAACATC 5891543
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| || || ||||| ||||
Sbjct 5891544 CAGAAAGAGTCGACGCTGCA-CTTG 5891567
Score = 168 bits (186), Expect = 2e-36
Identities = 161/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || ||||| ||||| ||||| || |||||||| ||||| || ||||| |||
Sbjct 5916565 CAGATTTTTGTAAAAACCCTCACCGGAAAGACCATCACCCTGGAGGTCGAGAGCTCCGAC 5916624
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| ||| ||||| ||||| || || || || || || ||||||||
Sbjct 5916625 ACCATTGACAACGTGAAAGCGAAGATCCAGGATAAGGAGGGCATTCCACCAGACCAGCAG 5916684
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || ||||||||||| ||||| ||||| || | || || |||||||| ||| |
Sbjct 5916685 AGGCTGATTTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCGCCGATTACAACATT 5916744
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|||||||| ||||| ||||| ||||
Sbjct 5916745 CAAAAAGAGTCAACTCTGCA-CTTG 5916768
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| ||||| |||||||| || || || | || || |||||||| |||
Sbjct 5891136 CAGATATTTGTGAAGACTCTTACAGGAAAGACCATTACTTTGGAAGTCGAAAGCTCCGAC 5891195
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| ||||| |||||||| || || || || |||||||||||
Sbjct 5891196 ACCATCGACAATGTTAAAGCCAAGATCCAGGACAAGGAGGGTATTCCACCGGACCAGCAG 5891255
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| ||||| || |||||||||||||| | || ||||||||||| || ||
Sbjct 5891256 AGGCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGGCGAACCCTTGCCGATTACAATATC 5891315
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| ||||| || || ||||
Sbjct 5891316 CAGAAAGAGTCAACTCTTCA-CTTG 5891339
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || |||||||| || ||||| || || || || ||||| |||||||| |||
Sbjct 5891592 CAGATTTTTGTTAAAACTCTAACCGGAAAGACAATTACTCTAGAGGTCGAAAGCTCCGAC 5891651
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| ||| ||||| ||||| || || || || || |||||||||||
Sbjct 5891652 ACCATTGACAACGTGAAAGCTAAGATCCAGGATAAGGAGGGCATTCCACCGGACCAGCAG 5891711
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || ||||| || || ||||| ||||| || | ||||| || ||||| ||| |
Sbjct 5891712 AGGCTGATTTTCGCGGGGAAGCAGCTGGAAGACGGCCGAACTCTCGCGGATTACAACATT 5891771
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| ||||| || || ||||
Sbjct 5891772 CAGAAAGAGTCAACCCTCCA-CTTG 5891795
Score = 127 bits (140), Expect = 5e-24
Identities = 108/133 (81%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 178009 TTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGC 178068
|||||||||| ||||| || ||||| || ||||| || | || || || || ||||| |
Sbjct 22348586 TTCAGGACAAGGAAGGCATTCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAAC 22348645
Query 178069 TCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
| |||||||| | |||||||| ||||||||| |||||||||| || ||||| || ||||
Sbjct 22348646 TGGAAGATGGTCGCACTCTTGCAGATTATAACATCCAAAAAGAGTCCACACTTCACCTTG 22348705
Query 178129 TTTTGAGACTCAG 178141
||||||| |||||
Sbjct 22348706 TTTTGAGGCTCAG 22348718
Score = 84.2 bits (92), Expect = 5e-11
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || |||||||| |||||||| || ||| |||
Sbjct 22340650 CAGATCTTCGTGAAAACCCTAACTGGGAAGACGATCACTCTCGAGGTCGAGAGCAGCGAC 22340709
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGG 178014
|||||||| || |||||| ||||||||||
Sbjct 22340710 ACCATCGACAATGTCAAAGCCAAGATTCAGG 22340740
>seq42
Length=30274277
Score = 168 bits (186), Expect = 2e-36
Identities = 163/208 (78%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||| || ||||| |||||||| ||||| || || || || || ||||||
Sbjct 11481854 CAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACACTTGAAGTTGAGAGTTCAGAC 11481913
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| ||| ||| || |||||||| || || ||||| || ||||||||
Sbjct 11481914 ACCATTGATAACGTTAAAGCAAAAATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAG 11481973
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || || || || || |||||||||||||| |||| | |||||||| ||| ||
Sbjct 11481974 AGGCTCATATTTGCTGGTAAGCAGCTCGAAGATGGTCGGACATTGGCCGATTACAACATC 11482033
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || |||||||| || || |||| ||
Sbjct 11482034 CAGAAGGAATCAACCCTTCA-CTTGGTT 11482060
Score = 165 bits (182), Expect = 2e-35
Identities = 162/208 (78%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||| || ||||| |||||||| |||||||| || || || |||||||||
Sbjct 11334747 CAAATTTTTGTGAAGACCCTCACTGGAAAAACTATCACCCTTGAAGTTGAGAGCTCAGAC 11334688
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || |||||| || || |||||||| || || || || || ||||||||
Sbjct 11334687 ACCATTGATAATGTCAAAGCGAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAG 11334628
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| ||||| || || || || |||||||| ||||| |||| | || ||||||||| ||
Sbjct 11334627 AGGCTTATATTTGCTGGTAAGCAGCTCGAGGATGGCCGGACATTGGCTGATTATAACATC 11334568
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| ||||| || || || || |||| ||
Sbjct 11334567 CAGAAAGAGTCCACCCTTCA-CTTGGTT 11334541
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| ||||| || || ||||| ||||||||||| || |||||||| ||||| |||
Sbjct 11482538 CAGATTTTTGTGAAGACCCTGACAGGTAAAACGATCACACTAGAGGTGGAGAGCTCTGAC 11482597
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||||||| ||||| || || |||||||| || |||||
Sbjct 11482598 ACCATAGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATCCCTCCAGATCAGCAG 11482657
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || ||||| ||||| || ||||| |||| | | ||||| || |
Sbjct 11482658 AGGCTCATCTTTGCTGGAAAGCAGCTAGAGGATGGGCGGACCTTGGTAGATTACAATATT 11482717
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || ||||| ||||| ||||||||| | |||||
Sbjct 11482718 CAGAAGGAATCTACACTTCATCTTGTTCTTCGACTC 11482753
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||| || || || || ||||| |||||||| || || || || ||||||
Sbjct 11482082 CAAATTTTTGTGAAGACCCTTACTGGTAAAACTATCACCCTTGAAGTAGAGAGTTCAGAC 11482141
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| ||| ||||||||||| ||||| || || || ||||||||
Sbjct 11482142 ACTATTGATAATGTGAAAGCAAAAATTCAGGACAAGGAAGGTATTCCACCTGACCAGCAG 11482201
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || || ||||| |||||||| | ||| | || || || ||| |
Sbjct 11482202 AGGCTAATCTTTGCTGGTAAGCAGCTAGAAGATGGTCGAACTTTGGCTGACTACAACATA 11482261
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || |||||||| || || ||||||
Sbjct 11482262 CAGAAGGAATCAACCCTTCACCTTGTT 11482288
Score = 149 bits (164), Expect = 2e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| ||||| || | || || ||||| ||||| || || || || |||||||||
Sbjct 11334063 CAGATTTTTGTGAAGACCTTAACTGGTAAAACAATCACTCTTGAAGTTGAGAGCTCAGAC 11334004
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||| || |||||||| ||||| || ||||| ||||| ||
Sbjct 11334003 ACAATTGACAATGTCAAGGCAAAAATCCAGGACAAGGAAGGCATTCCTCCTGACCAACAG 11333944
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || ||||||||||| || ||||| | ||| | || || || ||| |
Sbjct 11333943 AGGCTGATCTTTGCTGGAAAACAGCTTGAGGATGGCCGCACTTTGGCTGACTACAACATA 11333884
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| |||||||| || ||||| ||||||
Sbjct 11333883 CAGAAAGAATCCACGCTGCACCTTGTT 11333857
Score = 149 bits (164), Expect = 2e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || || || ||||| || |||||||| ||||| |||
Sbjct 11520064 CAAATATTTGTAAAGACGCTGACCGGGAAGACCATCACTCTTGAGGTGGAGAGCTCTGAC 11520123
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||| || ||||| || || ||||| || || |||||
Sbjct 11520124 ACAATCGACAATGTGAAGGCGAAGATCCAAGACAAGGAGGGTATCCCCCCAGATCAGCAG 11520183
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || |||||||| || |||||||||||||| || ||||| ||| |
Sbjct 11520184 AGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACAACATA 11520243
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
||||| ||||| || || || || |||
Sbjct 11520244 CAAAAGGAATCCACCCTTCACCTGGTT 11520270
Score = 143 bits (158), Expect = 6e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || || || ||||| || || ||||| ||||| ||
Sbjct 11327177 CAAATATTTGTAAAGACGCTGACCGGGAAGACCATCACTCTTGAAGTGGAGAGCTCTGAT 11327118
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || |||||| || ||||| || || ||||| || || |||||
Sbjct 11327117 ACAATCGACAATGTGAAGGCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGATCAGCAG 11327058
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || |||||||| || |||||||||||||| || ||||| ||| |
Sbjct 11327057 AGGCTCATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTGGCTGATTACAACATT 11326998
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
||||| ||||| || || || || |||
Sbjct 11326997 CAAAAGGAATCCACCCTTCACCTGGTT 11326971
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || ||||| ||||| || |||||||| || || || ||||| ||
Sbjct 11327633 CAAATATTTGTTAAGACACTCACTGGAAAGACCATCACCCTTGAAGTTGAGAGCTCTGAT 11327574
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || || || || ||||| ||||||||||| || || ||||||
Sbjct 11327573 ACGATTGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGATCAGCAA 11327514
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || || || ||||| ||||| || ||||| |||||| | |||||||||||| |
Sbjct 11327513 AGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCCGATTATAACATT 11327454
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || ||||| || || ||
Sbjct 11327453 CAGAAAGAGTCCACACTCCACCTGGT 11327428
Score = 141 bits (156), Expect = 2e-28
Identities = 157/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||| || ||||| |||||||| || ||||| || || || || ||||||
Sbjct 11334519 CAAATTTTTGTGAAGACCCTCACTGGAAAAACTATTACCCTTGAAGTTGAGAGTTCAGAC 11334460
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| || || |||||||| || || || || || ||||||||
Sbjct 11334459 ACCATCGATAATGTGAAAGCTAAAATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAG 11334400
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || || || || |||||||| |||||||| |||| | || || || ||| ||
Sbjct 11334399 AGGCTCATATTTGCTGGTAAACAGCTGGAAGATGGTCGGACATTGGCGGACTACAACATC 11334340
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || || || || || |||| ||
Sbjct 11334339 CAGAAGGAGTCTACCCTTCA-CTTGGTT 11334313
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || ||||| ||||| || |||||||| || || || ||||| ||
Sbjct 11519608 CAAATATTTGTTAAGACACTCACTGGAAAGACCATCACCCTTGAAGTTGAGAGCTCTGAT 11519667
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || || || || ||||| ||||||||||| || || ||||||
Sbjct 11519668 ACGATTGACAATGTAAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGATCAGCAA 11519727
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || || || ||||| ||||| || ||||| |||||| | |||||||||||| |
Sbjct 11519728 AGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCCGATTATAACATT 11519787
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || ||||| || || ||
Sbjct 11519788 CAGAAAGAGTCCACACTCCACCTGGT 11519813
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || ||||| |||||||| || |||||||| |||||||||
Sbjct 11520292 CAGATATTTGTGAAGACCCTGACGGGAAAGACGATCACACTAGAGGTGGAGAGCTCAGAC 11520351
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || || ||||||||||| || || |||||||| || |||||
Sbjct 11520352 ACCATAGATAATGTGAAGGCCAAAATTCAGGACAAGGAGGGGATCCCTCCAGATCAGCAG 11520411
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || || ||| | || ||||| |||| ||||| ||||| ||| |
Sbjct 11520412 AGGCTGATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACACTTGCTGATTACAACATT 11520471
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 11520472 CAGAAGGAGTCCACTCTTCA-CTTG 11520495
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || || ||||| ||||| || || || || |||||||||
Sbjct 11482310 CAGATATTTGTGAAGACCTTAACTGGTAAAACAATCACTCTTGAAGTTGAGAGCTCAGAC 11482369
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||| ||||||||||| ||||| || ||||| ||||| ||
Sbjct 11482370 ACAATTGACAATGTCAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCTGACCAACAG 11482429
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || ||||||||||| || ||||| | ||| | || || || || |
Sbjct 11482430 AGGCTGATCTTTGCTGGAAAACAGCTTGAGGATGGCCGCACTTTGGCTGACTACAATATA 11482489
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| |||||||| || || || ||||||
Sbjct 11482490 CAGAAAGAATCTACGCTTCACCTTGTT 11482516
Score = 138 bits (152), Expect = 3e-27
Identities = 156/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || ||||| || || || || ||||| || |||||||||
Sbjct 11326949 CAGATATTTGTGAAGACCCTGACGGGAAAGACAATTACACTAGAGGTTGAGAGCTCAGAC 11326890
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||| ||||||||||| ||||| |||||||| || |||||
Sbjct 11326889 ACTATAGATAATGTGAAGGCAAAAATTCAGGACAAGGAAGGGATCCCTCCAGATCAGCAG 11326830
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || || ||| | || ||||| |||||||||| ||||| ||| |
Sbjct 11326829 AGGCTCATCTTTGCAGGGAAGCAGTTGGAGGATGGTCGGACTCTTGCTGATTACAACATT 11326770
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || || || || || |||| ||
Sbjct 11326769 CAGAAGGAGTCTACTCTTCA-CTTGGTT 11326743
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || |||||||| || || || || || || || || ||
Sbjct 11335203 CAGATCTTTGTTAAGACCCTTACTGGAAAAACCATAACTCTTGAAGTTGAGAGTTCTGAT 11335144
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||| || || ||||| || || ||||| || |||||||||
Sbjct 11335143 ACCATTGACAATGTTAAGGCAAAAATCCAAGACAAGGAGGGTATCCCCCCTGACCAGCAA 11335084
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || || || ||||| |||||||| ||||| |||||| | |||||||||||| |
Sbjct 11335083 AGGTTGATTTTTGCTGGAAAGCAGCTCGAGGATGGTAGGACTTTGGCCGATTATAACATT 11335024
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|||||||| || || || || |||||
Sbjct 11335023 CAAAAAGAGTCCACCCTACACCTTGT 11334998
Score = 138 bits (152), Expect = 3e-27
Identities = 156/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| ||||| || || || || || || || ||||| || || || || ||||||
Sbjct 11481626 CAAATTTTTGTGAAGACCCTTACTGGTAAGACCATTACCCTTGAAGTTGAGAGTTCAGAC 11481685
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| || || |||||||| || || || || || ||||||||
Sbjct 11481686 ACCATCGATAATGTTAAAGCGAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAG 11481745
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || || || || || ||||| || ||||| |||| | || ||||||||| ||
Sbjct 11481746 AGGCTCATTTTTGCAGGTAAGCAGCTTGAGGATGGCCGGACATTGGCTGATTATAACATC 11481805
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| ||||| || ||||| || |||| ||
Sbjct 11481806 CAGAAAGAGTCCACACTTCA-CTTGGTT 11481832
Score = 129 bits (142), Expect = 1e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || |||||||| || || |||||||| || || || ||
Sbjct 11481170 CAGATCTTTGTTAAGACCCTTACTGGAAAAACAATAACTCTCGAGGTTGAGAGTTCTGAT 11481229
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || || || || ||||| || || ||||| || |||||||||
Sbjct 11481230 ACCATTGACAATGTTAAGGCGAAAATCCAAGACAAGGAGGGTATCCCCCCTGACCAGCAA 11481289
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || || || ||||| ||||| || ||||| |||||| | |||||||||||| |
Sbjct 11481290 AGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGCAGGACTTTGGCCGATTATAACATT 11481349
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || || || || ||
Sbjct 11481350 CAGAAAGATTCCACCCTACACCTGGT 11481375
>seq12
Length=21026613
Score = 156 bits (172), Expect = 1e-32
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || || || ||||| |||||||| ||| |||
Sbjct 4557010 CAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTTGAGGTGGAGTCCTCTGAC 4557069
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| ||||| || |||||||||||||||
Sbjct 4557070 ACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAGCAA 4557129
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| || |||||||| || || |||| || || || || ||| ||
Sbjct 4557130 CGCCTCATATTCGCCGGGAAGCAGCTCGAGGACGGCCGGACCCTAGCTGACTACAACATC 4557189
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || || || || || | | ||||||
Sbjct 4557190 CAGAAGGAGTCTACCCTCCACCTGGTGCTCCGCCTCAGA 4557228
>seq23
Length=22385789
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || || || ||| | ||||| ||| || |||
Sbjct 4579664 CAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCTTAGAGGTTGAATCGTCTGAC 4579723
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || | ||| ||||| |||||||| ||||| ||||| |||||||||||
Sbjct 4579724 ACCATCGACAATGCCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGACCAGCAG 4579783
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| ||||||||||| || || || | || || ||||| || ||| ||
Sbjct 4579784 CGTCTCATCTTCGCTGGAAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTACAACATC 4579843
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 4579844 CAGAAGGAGTCGACCCTCCACCTGGT 4579869
Score = 98.7 bits (108), Expect = 2e-15
Identities = 75/89 (84%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||||||||| ||||| ||||| ||| | |||||||||||||| ||||| ||||||||| |
Sbjct 17078994 AGGAATCCCACCGGATCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTTGAAGATGGACG 17079053
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||||||| || || ||| |||| ||||
Sbjct 17079054 AACTCTTGCTGACTACAACATCCAGAAAG 17079082
Score = 93.3 bits (102), Expect = 1e-13
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || ||||| ||||| ||||| || ||| |||
Sbjct 17078650 CAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTAGAGAGCAGTGAC 17078709
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
||||| || ||||||||| |||||||||||||| |||||
Sbjct 17078710 ACCATTGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGG 17078750
>seq49
Length=17126926
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || || || || || || ||||| ||||| ||| || |||
Sbjct 13269711 CAGATTTTCGTGAAGACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCATCTGAC 13269770
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| || ||||| ||||| ||||| |||||||||||
Sbjct 13269771 ACGATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCAGCAG 13269830
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || |||||||| || || || | || || ||||| || || ||
Sbjct 13269831 CGCCTCATCTTCGCTGGCAAACAGCTGGAGGACGGCCGAACCCTAGCCGACTACAATATC 13269890
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || ||||| || || || ||
Sbjct 13269891 CAGAAGGAGTCAACCCTCCACCTGGT 13269916
>seq44
Length=22053297
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||| || |||||||||||||| ||||| ||||| || ||||| ||||| || ||||| |
Sbjct 21449389 AGGGATTCCTCCGGACCAGCAGCGACTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCG 21449330
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||||||| ||||| || |||| ||||
Sbjct 21449329 CACTCTTGCTGATTACAATATCCAGAAAG 21449301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203701788708958
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |