Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2139 87.8 1e-12 seq648 87.8 1e-12 >seq2139 Length=5518 Score = 87.8 bits (96), Expect = 1e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || ||||| | || ||||||||||||||||||||| | Sbjct 200 ACATGAGCAATCATGCATGTCAAAAGTGCGTAAGAAGCAATGTTAAATGGCACTCCCAGG 141 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 ||||| ||||| || | ||||||| ||||| || | || |||| Sbjct 140 CCCATGTCAGCAGAACGCTGATACATCTGACATGACAACTCCCCAT 95 >seq648 Length=46659 Score = 87.8 bits (96), Expect = 1e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || ||||| | || ||||||||||||||||||||| | Sbjct 3011 ACATGAGCAATCATGCATGTCAAAAGTGCGTAAGAAGCAATGTTAAATGGCACTCCCAGG 2952 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 ||||| ||||| || | ||||||| ||||| || | || |||| Sbjct 2951 CCCATGTCAGCAGAACGCTGATACATCTGACATGACAACTCCCCAT 2906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361230115235039