Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 109 6e-19 seq3 100 3e-16 seq38 98.7 1e-15 seq12 98.7 1e-15 seq4 89.7 6e-13 seq9 86.0 7e-12 seq2 82.4 9e-11 >seq1 Length=42390363 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||||||||||||||||||||||| | || |||| |||||| ||||| || Sbjct 31834122 CTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCATCCTCTAACTGCTTCCCAGCAAA 31834063 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 || | | ||||||||| | || | | |||||||||| ||| | || || |||| Sbjct 31834062 GATCAACCTCTGCTGGTCTGGAGGTATACCCTCCTTGTCC-TGAATCTTAGTCTTGACAT 31834004 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || |||| ||||| || | |||||||| || || || || |||| Sbjct 31834003 TATCAATGGTATCGGAGCTC---TCCACTTCTAAAGTGATGGTCTTCCCAGTAAGGGTCT 31833947 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 31833946 TCACAAAGATCTGCAT 31833931 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||||||||| || || ||| | || || ||||| || |||||||| Sbjct 31833666 CTCCTTCTGGATATTGTAATCAGCGAGGGTACGCCCATCCTCGAGCTGTTTGCCAGCGAA 31833607 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||| | || | || |||||||| ||| || |||| ||| Sbjct 31833606 GATGAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 31833548 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | |||||||| ||||| || || |||| Sbjct 31833547 TGTCGATGGTGTCGGAGCTC---TCGACCTCCAGAGTGATGGTCTTGCCGGTGAGAGTCT 31833491 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 31833490 TGACGAAGATCTGCAT 31833475 Score = 102 bits (112), Expect = 9e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| ||||| || || ||||| ||||| ||||||| | Sbjct 34329807 ACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCC 34329748 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||| || || ||||| ||||| | ||||||||| | || | | |||||| Sbjct 34329747 GTCCTCAAGCTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCCTT 34329688 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| | || | | ||| | || |||||| ||| || || | || | Sbjct 34329687 GTCT-TGAATCTTGGCCTTCACGTTGTCAATAGTGTCGGAACTTTCGACCTCCAGAGTAA 34329629 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||||| || || || ||||| ||||||||||||||| Sbjct 34329628 TGGTTTTTCCGGTGAGGGTCTTGACAAAGATTTGCATT 34329591 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || |||||| || || ||||| ||||| || |||| | Sbjct 34330035 ACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTTCC 34329976 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||||||||| ||||| | ||||||||| | || | | ||||| Sbjct 34329975 ATCCTCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCTTCCTT 34329916 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| |||||| |||| | | | || ||| |||||| || | ||||| Sbjct 34329915 ATCCTGGATTTTGGCCTTGACATTGTCAATGGTATCGGAACTTTCCACCTCCAGGGTGAT 34329856 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || ||||| || ||||||||||| Sbjct 34329855 CGTCTTTCCGGTAAGGGTCTTGACGAAGATTTGCAT 34329820 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| |||| || |||||| ||||| ||||| ||||| || |||| | | || || Sbjct 34330256 ACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTCCCATCCTCG 34330197 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||||||||||||||| || || | |||||| || | || | | |||||||||| || Sbjct 34330196 AGCTGCTTACCAGCGAAGATAAGCCTCTGCTGATCTGGGGGAATTCCCTCCTTGTCC-TG 34330138 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 | | || | |||| | | | ||||| ||| ||| || || | |||||||| Sbjct 34330137 AATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCT---TTCAACCTCCAAAGTGATGGT 34330081 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || || | ||||| || || || |||||| Sbjct 34330080 TTTCCCTGTCAAAGTCTTAACGAAAATCTGCATT 34330047 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||| || || || || |||| || |||||||| || ||||| Sbjct 31833438 CTCCTTCTGGATGTTGTAATCTGCGAGGGTTCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 31833379 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | |||||| || | || | || |||||||||| ||| || |||| ||| Sbjct 31833378 GATCAACCTCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 31833320 Query 43112 CGCC-ACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| || || |||| || ||||| ||||| ||||| || | Sbjct 31833319 TGTCGATGGTGTCGGAACTC---TCGACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTT 31833263 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 31833262 TGACGAAGATTTGCAT 31833247 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||||||||| | | || || | |||||| ||||| || Sbjct 13906958 CTCCTTCTGAATGTTGTAATCAGCCAGAGTTCTTCCATCCTCCAACTGCTTTCCAGCAAA 13907017 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | | ||| ||||| | || | | |||||| ||| ||| | || | ||||| Sbjct 13907018 GATCAACCTCTGTTGGTCTGGTGGGATACCCTCCTTATCC-TGAATCTTAGCTTTGACAT 13907076 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | |||||||| || || || || |||| Sbjct 13907077 TATCAATAGTGTCAGAGCTC---TCCACTTCCAGAGTGATGGTCTTTCCAGTGAGAGTCT 13907133 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 13907134 TCACAAAGATCTGCAT 13907149 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || || || || || |||| ||||| ||||| || ||||| Sbjct 13907642 CTCCTTCTGGATATTGTAGTCGGCTAGGGTACGACCGTCCTCTAGTTGCTTTCCTGCGAA 13907701 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | || || || || | || | | ||| |||||| ||| || ||||| ||| Sbjct 13907702 GATCAATCTTTGTTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCTTTGA-CGT 13907760 Query 43112 CGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || |||| |||||||| ||||| |||| || | Sbjct 13907761 TGTCGATGGTGTCAGAGCTC---TCGACCTCGAGAGTGATGGTCTTGCCGGTTAAGGTTT 13907817 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 13907818 TGACGAAGATTTGCAT 13907833 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || | ||||| ||| | ||| | || |||||| ||||| ||||||||||| Sbjct 13907151 CCACCCCTGAGACGCAGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCA 13907210 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || |||||||| |||||||| || | | ||||||||| | || Sbjct 13907211 AGGGTCCTGCCATCCTCAAGCTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCCGGGGGT 13907270 Query 43077 ACGCTCTCCTTGTCCATGATTTT 43099 | | ||||||||| |||||| Sbjct 13907271 ATACCCTCCTTGTCTTGGATTTT 13907293 >seq3 Length=26737297 Score = 100 bits (110), Expect = 3e-16 Identities = 150/209 (72%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 |||||| ||| ||||| ||||| ||||||||||| ||||||| | || || ||||| Sbjct 2107019 ATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGCAAGAGTCCTACCATCCTCCAGCTG 2106960 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| ||||||||||| || | |||||| || | || | | ||| |||||| || | | Sbjct 2106959 CTTTCCAGCGAATATAAGCCTCTGCTGATCAGGGGGAATACCCTCTTTGTCC-TGTATCT 2106901 Query 43100 TTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 43155 | || |||| | | | || || ||| ||||| || | ||||||||||| | Sbjct 2106900 TAGTCTTGACATTGTCAATTGTATCAGAACTC---TCCACCTCAAGGGTGATGGTTTTTC 2106844 Query 43156 CCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || || ||||| ||||| || |||||| Sbjct 2106843 CAGTCAGGGTCTTAACAAAAATCTGCATT 2106815 Score = 100 bits (110), Expect = 3e-16 Identities = 150/209 (72%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 42980 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 43039 |||||| ||| ||||| ||||| ||||||||||| ||||||| | || || ||||| Sbjct 2755435 ATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGCAAGAGTCCTACCATCCTCCAGCTG 2755494 Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| ||||||||||| || | |||||| || | || | | ||| |||||| || | | Sbjct 2755495 CTTTCCAGCGAATATAAGCCTCTGCTGATCAGGGGGAATACCCTCTTTGTCC-TGTATCT 2755553 Query 43100 TTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 43155 | || |||| | | | || || ||| ||||| || | ||||||||||| | Sbjct 2755554 TAGTCTTGACATTGTCAATTGTATCAGAACTC---TCCACCTCAAGGGTGATGGTTTTTC 2755610 Query 43156 CCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || || ||||| ||||| || |||||| Sbjct 2755611 CAGTCAGGGTCTTAACAAAAATCTGCATT 2755639 >seq38 Length=323574 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | || | ||||||||||| || ||||| || |||||||| || || Sbjct 34655 CCACCTCTCAGCCGAAGCACCAAATGCAGGGTCGATTCCTTCTGGATATTGTAGTCGGCG 34596 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| | || || | ||||| || || || || || ||||||||||| | || Sbjct 34595 AGAGTCCTTCCATCCTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGG 34536 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | || ||||||||| ||| | || | ||||| ||| | | | ||||| |||| | Sbjct 34535 ATGCCTTCCTTGTCC-TGAATCTTGGCTTTGA-CGTTGTCAATGGTGTCGGAGCTC---T 34481 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | ||||| || || || || | |||||| |||||||||||||| Sbjct 34480 CGACCTCCAGAGTGATTGTCTTTCCTGTCAACGTCTTGACAAAGATTTGCAT 34429 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | || | ||||||||||| || ||||| || |||||||| || || Sbjct 52921 CCACCTCTCAGCCGAAGCACCAAATGCAGGGTCGATTCCTTCTGGATATTGTAGTCGGCG 52862 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| | || || | ||||| || || || || || ||||||||||| | || Sbjct 52861 AGAGTCCTTCCATCCTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGG 52802 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | || ||||||||| ||| | || | ||||| ||| | | | ||||| |||| | Sbjct 52801 ATGCCTTCCTTGTCC-TGAATCTTGGCTTTGA-CGTTGTCAATGGTGTCGGAGCTC---T 52747 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | ||||| || || || || | |||||| |||||||||||||| Sbjct 52746 CGACCTCCAGAGTGATTGTCTTTCCTGTCAACGTCTTGACAAAGATTTGCAT 52695 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| || || || | || || | |||||| ||||| || Sbjct 34848 CTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAACTGCTTCCCAGCAAA 34789 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| |||||||| || | || | | |||||||||| ||| |||| | ||| | Sbjct 34788 GATGAGACGCTGCTGATCCGGTGGAATACCCTCCTTGTCC-TGAATTTTAGCTTTCACAT 34730 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || |||| ||||| || | ||||| || || || || || |||| Sbjct 34729 TGTCAATGGTATCCGAGCTC---TCCACCTCCAAAGTGATCGTCTTCCCAGTCAGGGTCT 34673 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 34672 TCACAAAGATCTGCAT 34657 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || ||||||||||| || || ||||| |||| || | || || |||||||| Sbjct 34391 TCCTTCTGGATATTGTAATCGGCAAGGGTCCGACCGTCTTCCAATTGTTTTCCAGCGAAG 34332 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | ||||||||| ||| || ||||| ||| Sbjct 34331 ATCAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 34273 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || || | || ||||| || || || || ||||| Sbjct 34272 GTCGATGGTGTCGGAGCTC---TCAACTTCTAGGGTTATGGTCTTTCCGGTGAGAGTCTT 34216 Query 43169 TACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 34215 CACGAAGATTTGCAT 34201 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||||||||| |||||||| | || ||||| || || || ||||| Sbjct 52429 TCCTTCTGGATGTTGTAATCAGCGAGAGTCCGGCCATCCTCTAGTTGTTTTCCGGCGAAG 52370 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||||| | || | || || |||||| ||| || |||| ||| Sbjct 52369 ATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGA-CGTT 52311 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || || | |||||||| || || ||||| || || Sbjct 52310 GTCAATGGTGTCGGAGCTC---TCGACCTCCAAAGTGATGGTCTTTCCGGTTAGGGTTTT 52254 Query 43169 TACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 52253 CACAAAGATCTGCAT 52239 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| || || || | || || | |||||| ||||| || Sbjct 53114 CTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAACTGCTTCCCAGCAAA 53055 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| |||||||| || | || | | |||||||||| ||| | || | ||| | Sbjct 53054 GATGAGGCGCTGCTGATCAGGTGGAATACCCTCCTTGTCC-TGAATCTTAGCTTTCACAT 52996 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || |||| ||||| || | ||||| || || || || || |||| Sbjct 52995 TGTCAATGGTATCCGAGCTC---TCCACCTCCAGAGTGATCGTCTTCCCAGTCAGGGTCT 52939 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||| ||||| Sbjct 52938 TCACGAAGATCTGCAT 52923 >seq12 Length=19346091 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | || | ||||||||||| || ||||| || |||||||| || || Sbjct 17399652 CCACCTCTCAGCCGAAGCACCAAATGCAGGGTCGATTCCTTCTGGATATTGTAGTCGGCG 17399593 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| | || || | ||||| || || || || || ||||||||||| | || Sbjct 17399592 AGAGTCCTTCCATCCTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGG 17399533 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | || ||||||||| ||| | || | ||||| ||| | | | ||||| |||| | Sbjct 17399532 ATGCCTTCCTTGTCC-TGAATCTTGGCTTTGA-CGTTGTCAATGGTGTCGGAGCTC---T 17399478 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | ||||| || || || || | |||||| |||||||||||||| Sbjct 17399477 CGACCTCCAGAGTGATCGTCTTTCCTGTCAACGTCTTGACAAAGATTTGCAT 17399426 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| || || || | || || | |||||| ||||| || Sbjct 17382504 CTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAACTGCTTCCCAGCAAA 17382445 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || |||||||| || | ||| | | |||||||||| ||| |||| | ||| | Sbjct 17382444 GATAAGACGCTGCTGATCCGGCGGAATACCCTCCTTGTCC-TGAATTTTAGCTTTCACAT 17382386 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || || |||| ||||| || | ||||| || || || || || |||| Sbjct 17382385 TGTCAATGGTATCTGAGCTC---TCCACCTCCAAAGTGATCGTCTTCCCAGTCAGGGTCT 17382329 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 17382328 TCACAAAGATCTGCAT 17382313 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || ||||||||||| || || ||||| |||| || | || || |||||||| Sbjct 17382140 TCCTTCTGGATATTGTAATCGGCAAGGGTCCGACCGTCTTCCAATTGTTTTCCAGCGAAG 17382081 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | ||||||||| ||| || ||||| ||| Sbjct 17382080 ATCAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 17382022 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || || | || ||||| || || || || ||||| Sbjct 17382021 GTCGATGGTGTCGGAGCTC---TCAACTTCTAGGGTTATGGTCTTTCCGGTGAGAGTCTT 17381965 Query 43169 TACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 17381964 GACGAAGATTTGCAT 17381950 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||| || |||||||| | || ||||| || || || |||||| Sbjct 17381912 TCCTTCTGGATGTTGTAATCGGCGAGAGTCCGGCCATCCTCTAGTTGTTTGCCGGCGAAT 17381853 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||||| | || | | || |||||| ||| || |||| | Sbjct 17381852 ATGAGCCTTTGCTGGTCCGGTGGAATACCTTCTTTGTCCTGGATCTTGGCCTTGACGTTA 17381793 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | ||||| |||| || || || | |||||||| ||||| ||||| || || Sbjct 17381792 TCAATGGTGTCAGAGCTC---TCGACCTCCAAAGTGATGGTCTTGCCAGTTAGGGTTTTC 17381736 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 17381735 ACGAAGATCTGCAT 17381722 Score = 84.2 bits (92), Expect = 3e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||||||||| |||||||| | || ||||| || || || || || Sbjct 17399160 TCCTTCTGGATGTTGTAATCAGCGAGAGTCCGGCCATCCTCTAGTTGTTTTCCGGCAAAG 17399101 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | |||||||| | || | | || |||||| ||| || |||| ||| Sbjct 17399100 ATGAGCCTTTGCTGGTCCGGTGGAATACCTTCTTTGTCCTGGATCTTGGCCTTGA-CGTT 17399042 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || || | |||||||| ||||| || || || || Sbjct 17399041 GTCAATGGTGTCGGAGCTC---TCGACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTTTT 17398985 Query 43169 TACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 17398984 CACAAAGATCTGCAT 17398970 Score = 84.2 bits (92), Expect = 3e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || ||||||||||| || || || || | || || | ||||| || ||||| Sbjct 17399388 TCCTTCTGGATATTGTAATCTGCAAGGGTTCGACCATCTTCCAATTGCTTTCCCGCGAAG 17399329 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | ||||||||| ||| || ||||| ||| Sbjct 17399328 ATCAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 17399270 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| |||| || || || | || ||||| || || || || ||||| Sbjct 17399269 GTCGATGGTGTCGGAGCTC---TCAACTTCTAGGGTTATGGTCTTTCCGGTGAGAGTCTT 17399213 Query 43169 TACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 17399212 GACGAAGATTTGCAT 17399198 >seq4 Length=30445767 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| | |||| |||||| |||| || ||||| || || ||||| Sbjct 3595626 CTCCTTCTGAATGTTGTAGTTGGCCAAAGTCCGGCCGTCCTCCAGCTGTTTTCCGGCGAA 3595567 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||||||||| || || | || | | ||||||| | || | || | || ||| Sbjct 3595566 GATGAGTCGCTGTTGATCAGGAGGAATTCCTTCCTTGT-CTTGTATCTTCGCTTTCACGT 3595508 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || || | || ||||| |||||||| || || || | Sbjct 3595507 TGTCGATGGTGTCCGACGACTCAACCTCTATGGTTATGGTCTTGCCCGTAAGGGTTTTCA 3595448 Query 43171 CAAAGATTTGCAT 43183 | || |||||||| Sbjct 3595447 CGAAAATTTGCAT 3595435 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| | |||| |||||| |||| || ||||| || || ||||| Sbjct 2276511 CTCCTTCTGAATGTTGTAGTTGGCCAAAGTCCGGCCGTCCTCCAGCTGTTTTCCGGCGAA 2276452 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||||||||| || || | | | | ||||||| | || | || | || ||| Sbjct 2276451 GATGAGTCGCTGTTGATCAGGAGAAATTCCTTCCTTGT-CTTGTATCTTCGCTTTCACGT 2276393 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || || | || ||||| |||||||| || || || | Sbjct 2276392 TGTCGATGGTGTCCGACGACTCAACCTCTATGGTTATGGTCTTGCCCGTAAGGGTTTTCA 2276333 Query 43171 CAAAGATTTGCAT 43183 | || |||||||| Sbjct 2276332 CGAAAATTTGCAT 2276320 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| || | || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 2540297 AAAAAATTCCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 2540356 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 2540357 TCACCACTATACTAC 2540371 >seq9 Length=25348792 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | |||| |||| ||| | || |||||| || || |||||||| || Sbjct 3789917 TCCTCCCCTGAGTCGCAGAACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGC 3789858 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || | | || || || ||||| || |||||||| || ||||||||||| | ||| Sbjct 3789857 TAGGGTTCTGCCATCTTCCAGTTGCTTCCCTGCGAATATCAGCCGCTGCTGGTCCGGCGG 3789798 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| ||| || || | | | | ||||| ||| || || Sbjct 3789797 TATTCCTTCCTTGTCTTGGATCTTCGCCTTCACATTATCGATGGTGTCCGACGACTCGAC 3789738 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 || | ||| || || || ||||| || || || || ||||| ||||| ||| Sbjct 3789737 CTCTAGCGTTATTGTCTTACCCGTCAGGGTTTTCACGAAGATCTGCATCTTT 3789686 >seq2 Length=27986743 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| ||| || || ||| ||||||||| |||| |||||||||||||||| | Sbjct 7204709 ATTAAAAAAATTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAA 7204650 Query 60114 TACTCACCACTATACTAC 60131 |||||||||||||||||| Sbjct 7204649 TACTCACCACTATACTAC 7204632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571783369568920