Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq7 100 3e-16 >seq7 Length=27644224 Score = 100 bits (110), Expect = 3e-16 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| ||||||||||| || ||||||||||||||| |||||| || ||||| ||||||| Sbjct 22709649 ACAAGCAAAATCACAGTGCAGGCCCTCATCTCTAGAAATAAGCTCATTTGAGAATGTTAG 22709708 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13758 || |||||||| || | ||||| | ||||||||| ||| Sbjct 22709709 ACCAGGCATCAAGCCCCTCTTTTTAAGCCAAAATATGGCA 22709748 Score = 100 bits (110), Expect = 3e-16 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| ||||||||||| || ||||||||||||||| |||||| || ||||| ||||||| Sbjct 22995867 ACAAGCAAAATCACAGTGCAGGCCCTCATCTCTAGAAATAAGCTCATTTGAGAATGTTAG 22995808 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 13758 || |||||||| || | ||||| | ||||||||| ||| Sbjct 22995807 ACCAGGCATCAAGCCCCTCTTTTTAAGCCAAAATATGGCA 22995768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478560150477960