Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=42390363 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| ||||| || ||||| ||||| ||||||| || ||||| | || | ||| || | Sbjct 13906993 CATCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCCTCCT 13907052 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 |||| ||| || |||||| || ||| ||| || | |||||| || | || | Sbjct 13907053 TATCCTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTCTCCACTTCCAGAGTGA 13907112 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 | || || || || | |||||||||||| || |||||| Sbjct 13907113 TGGTCTTTCCAGTGAGAGTCTTCACAAAGATCTGCATG 13907150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354756893072772