Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq2180 93.3 5e-14 >seq2180 Length=5322 Score = 93.3 bits (102), Expect = 5e-14 Identities = 172/251 (69%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 6985 ATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGG 7044 ||| ||||||| || ||||| || | || |||||||| || || | |||| ||| || Sbjct 4125 ATCGCCCGGCTGGAGCAGTGCCAGGAAGACGGCCTGGTTGGCCTGGGCACCGCTATGCGG 4184 Query 7045 TTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC 7104 || || || ||||| ||| | || || | || || || || |||||||| |||| Sbjct 4185 CTGCACATTGGCGAAGCCGCAGCCGAAGAGCTGCTTTGCCCGTTCGATTGCCAGCGTCTC 4244 Query 7105 G---ATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGC 7161 | || || || | |||| ||||| ||||| || ||| || || |||||||| Sbjct 4245 GGCGATGTCGACGAACT---CGCATCCGCCGTAATAGCGCCGGCCGGGGTAGCCCTCAGC 4301 Query 7162 ATACTTGTTGGTAAAAATAGAACCCTGTGCTTTCATAACATCGTCTGACACATAGTTTTC 7221 ||| |||||||| | | || ||||| |||| ||| ||| | | || || ||| || Sbjct 4302 ATATTTGTTGGTCAGGACCGAGCCCTGGGCTTCCATGACAGCCTGGGAGACGATGTTCTC 4361 Query 7222 GGACGCAATCA 7232 || || |||| Sbjct 4362 CGAGGCGATCA 4372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555329954570440