Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2164 96.9 9e-15 >seq2164 Length=5404 Score = 96.9 bits (106), Expect = 9e-15 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 |||||| ||| | ||||| || ||| ||| || || || | |||||| | ||| | Sbjct 4340 TTGCTTCCTTGTGTGCATGAAAGATGATAGCATTGAAGGCATATATGACACCTTGAAGGA 4281 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG- 363724 |||||| |||| |||| ||||| |||||||||||||| || ||| | |||| Sbjct 4280 ATGTGCTGTTATCAGCAAGTCAGCAGGAGGAATTGGTGTATCAGCTCAAAATATCCGTGC 4221 Query 363725 CACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 ||||| |||||| ||||| || || | |||| | |||||||| | ||||| ||||| Sbjct 4220 CACAG-GCAGTTATATTCGTGGAACAAATGGGACA-TCGAATGGCATTGTTCCAATGCTA 4163 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 | || || | ||||||| | || || || || || ||||| ||| | || || Sbjct 4162 AGGGTTTTCAATGATACTGCTCGTTATGTTGATCAAGGGGGAGGCAAGAGGAAGGG 4107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303273627444998