Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq256 93.3 4e-14 seq3 84.2 2e-11 >seq256 Length=127809 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| |||||| |||| |||||| |||||| | |||| ||| || || ||||| ||| Sbjct 84920 GATAAGGAAGGCATCCCTCCTGATCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAA 84861 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| ||| | || ||||||||||| ||||| ||||| ||| | || |||| ||| Sbjct 84860 GATGGACGAACTCTTGCAGATTATAACATCCAAAAGGAGTCGACTCTTCACCTGGTCTTG 84801 Query 115499 AGATTGCGAGGAGGAA 115514 || | | ||||||| Sbjct 84800 AGGCTTAGGGGAGGAA 84785 >seq3 Length=26737297 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| ||||| | || |||| Sbjct 2107500 ATGCAAATTTTTGTGAAAACTCTGACTGGCAAAACAATTACTCTTGAGGTGGAGAGTTCG 2107559 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | ||||| || || ||||| || ||||| || |||| |||||| Sbjct 2107560 GACAC-AATCGACAATGTGAAGGCGAAAATCCAAGACAAAGAGGGGATCCCTCCTGATCA 2107618 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || ||||||| ||| ||||| ||| | || |||| || ||||||| ||||| Sbjct 2107619 GCAGAGGCTTATTTTTGCCGGCAAGCAACTGGAGGATGGGCGCACTCTGGCCGACTATAA 2107678 Query 115465 CATTCAAAAAGAG 115477 ||| ||||| ||| Sbjct 2107679 CATCCAAAAGGAG 2107691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425319174398680