Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 >seq1 Length=42390363 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 ||||| |||||| | || | |||||||||| | ||||||||||| || || | || Sbjct 13907056 GATAAGGAGGGTATCCCACCAGACCAACAGAGGTTGATCTTTGCTGGAAAGCAGTTGGAG 13906997 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| || |||| |||| |||||||| ||||||||||| || ||||||||| | || | Sbjct 13906996 GATGGAAGAACTCTGGCTGATTACAACATTCAGAAGGAGTCCACTCTTCATCTTGTCCTC 13906937 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 13906936 CGTCTTCGTGGTGG 13906923 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || || |||||| ||||| | |||| ||||| | ||||||||||| || || |||| Sbjct 31834024 GACAAGGAGGGTATACCTCCAGACCAGCAGAGGTTGATCTTTGCTGGGAAGCAGTTAGAG 31834083 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| || ||| |||| |||||||||||||||||||| || || |||||| | || | Sbjct 31834084 GATGGAAGGACTCTGGCTGATTACAATATTCAGAAGGAGTCCACCCTTCATCTTGTCCTC 31834143 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 31834144 CGTCTTCGTGGTGG 31834157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358103897710306