Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 6e-13 >seq4 Length=30445767 Score = 89.7 bits (98), Expect = 6e-13 Identities = 165/239 (69%), Gaps = 10/239 (4%) Strand=Plus/Plus Query 10837 GTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAA 10896 ||| || || || | ||||| ||| || || | | ||||| || ||||| || ||||| Sbjct 26227832 GTTAGTAGCTGCAACGACAATGATACCAGTGTTGCCTTCAAAACCGTCCATTTCTGTCAA 26227891 Query 10897 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA---CCCGCACTGCG 10953 ||||| || | ||| ||||| | ||||||||| | |||| || | || | Sbjct 26227892 AAGTTGGTTAAGGGTCTGTTCTCTTTCATCATTTCCTCC---ACCAATTCCAGTACCTCT 26227948 Query 10954 TTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGC 11013 |||| | || || || ||||||||||| | || || || || ||| ||| || ||| Sbjct 26227949 TTGCCTTCCAACAGCATCAATTTCATCAACAAATACAATGCAAGGTGCATTCTCCTTGGC 26228008 Query 11014 AACTTC--AAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070 |||| ||| | ||| || |||| ||||| ||||| ||||||||||| ||||| Sbjct 26228009 --CTTCTTAAAAAGATCACGCACTCGAGAAGCACCAACACCAACAAACATTTCTACAAA 26228065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597317840920120