Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 109 6e-19 seq38 100 3e-16 seq3 100 3e-16 seq12 98.7 1e-15 seq4 89.7 6e-13 >seq1 Length=42390363 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||||||||| || || ||| | || || ||||| || |||||||| Sbjct 31833666 CTCCTTCTGGATATTGTAATCAGCGAGGGTACGCCCATCCTCGAGCTGTTTGCCAGCGAA 31833607 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| | ||||||||| | ||| | || |||||||| ||| || |||| ||| Sbjct 31833606 GATGAGCCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 31833548 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | |||||||| ||||| || || |||| Sbjct 31833547 TGTCGATGGTGTCGGAGCTC---TCGACCTCCAGAGTGATGGTCTTGCCGGTGAGAGTCT 31833491 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||| ||||| Sbjct 31833490 TGACGAAGATCTGCAT 31833475 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||||||||||||||||||||||| | || |||| |||||| ||||| || Sbjct 31834122 CTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCATCCTCTAACTGCTTCCCAGCAAA 31834063 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135 || | | ||||||||| | || | | |||||||||| ||| | || || |||| Sbjct 31834062 GATCAACCTCTGCTGGTCTGGAGGTATACCCTCCTTGTCC-TGAATCTTAGTCTTGACAT 31834004 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || |||| ||||| || | |||||||| || || || || |||| Sbjct 31834003 TATCAATGGTATCGGAGCTC---TCCACTTCTAAAGTGATGGTCTTCCCAGTAAGGGTCT 31833947 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 31833946 TCACAAAGATCTGCAT 31833931 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | ||| ||||| || || ||||| ||||| ||||||| | Sbjct 34329807 ACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTGCC 34329748 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || ||||| || || ||||| ||||| | ||||||||| | ||| | | |||||| Sbjct 34329747 GTCCTCAAGCTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCCTT 34329688 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGA 42171 ||| ||| | || | | ||| | || |||||| ||| || || | || | Sbjct 34329687 GTCT-TGAATCTTGGCCTTCACGTTGTCAATAGTGTCGGAACTTTCGACCTCCAGAGTAA 34329629 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||||||| || || || ||||| ||||||||||||||| Sbjct 34329628 TGGTTTTTCCGGTGAGGGTCTTGACAAAGATTTGCATT 34329591 Score = 102 bits (112), Expect = 9e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | || |||||| || || ||||| ||||| || |||| | Sbjct 34330035 ACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTTCC 34329976 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||||||||| ||||| | ||||||||| | ||| | | ||||| Sbjct 34329975 ATCCTCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCTTCCTT 34329916 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| |||||| |||| | | | || ||| |||||| || | ||||| Sbjct 34329915 ATCCTGGATTTTGGCCTTGACATTGTCAATGGTATCGGAACTTTCCACCTCCAGGGTGAT 34329856 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || ||||| || ||||||||||| Sbjct 34329855 CGTCTTTCCGGTAAGGGTCTTGACGAAGATTTGCAT 34329820 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| |||| || |||||| ||||| ||||| ||||| || |||| | | || || Sbjct 34330256 ACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTCCCATCCTCG 34330197 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 ||||||||||||||||| || || | |||||| || | || | | |||||||||| || Sbjct 34330196 AGCTGCTTACCAGCGAAGATAAGCCTCTGCTGATCTGGGGGAATTCCCTCCTTGTCC-TG 34330138 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | | || | |||| | | | ||||| ||| ||| || || | |||||||| Sbjct 34330137 AATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCT---TTCAACCTCCAAAGTGATGGT 34330081 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||| || || | ||||| || || || |||||| Sbjct 34330080 TTTCCCTGTCAAAGTCTTAACGAAAATCTGCATT 34330047 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||||||||||||||| | | || || | |||||| ||||| || Sbjct 13906958 CTCCTTCTGAATGTTGTAATCAGCCAGAGTTCTTCCATCCTCCAACTGCTTTCCAGCAAA 13907017 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || | | ||| ||||| | ||| | | |||||| ||| ||| | || | ||||| Sbjct 13907018 GATCAACCTCTGTTGGTCTGGTGGGATACCCTCCTTATCC-TGAATCTTAGCTTTGACAT 13907076 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| ||||| || | |||||||| || || || || |||| Sbjct 13907077 TATCAATAGTGTCAGAGCTC---TCCACTTCCAGAGTGATGGTCTTTCCAGTGAGAGTCT 13907133 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 13907134 TCACAAAGATCTGCAT 13907149 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| || || || || |||| || |||||||| || ||||| Sbjct 31833438 CTCCTTCTGGATGTTGTAATCTGCGAGGGTTCGGCCGTCCTCGAGCTGCTTCCCGGCGAA 31833379 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | |||||| || | || | || |||||||||| ||| || |||| ||| Sbjct 31833378 GATCAACCTCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 31833320 Query 42137 CGCC-ACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| ||| || || |||| || ||||| ||||| ||||| || | Sbjct 31833319 TGTCGATGGTGTCGGAACTC---TCGACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTT 31833263 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||||||||| Sbjct 31833262 TGACGAAGATTTGCAT 31833247 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||| || || || || || |||| ||||| ||||| || ||||| Sbjct 13907642 CTCCTTCTGGATATTGTAGTCGGCTAGGGTACGACCGTCCTCTAGTTGCTTTCCTGCGAA 13907701 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | || || || || | || | | ||| |||||| ||| || ||||| ||| Sbjct 13907702 GATCAATCTTTGTTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCTTTGA-CGT 13907760 Query 42137 CGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || |||| |||||||| ||||| |||| || | Sbjct 13907761 TGTCGATGGTGTCAGAGCTC---TCGACCTCGAGAGTGATGGTCTTGCCGGTTAAGGTTT 13907817 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||||||||| Sbjct 13907818 TGACGAAGATTTGCAT 13907833 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || | ||||| ||| | ||| | || |||||| ||||| ||||||||||| Sbjct 13907151 CCACCCCTGAGACGCAGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCA 13907210 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || |||||||| |||||||| || | | ||||||||| | || Sbjct 13907211 AGGGTCCTGCCATCCTCAAGCTGCTTTCCAGCGAAAATCAACCTCTGCTGGTCCGGGGGT 13907270 Query 42102 ACGCTCTCCTTGTCCATGATTTT 42124 | | ||||||||| |||||| Sbjct 13907271 ATACCCTCCTTGTCTTGGATTTT 13907293 >seq38 Length=323574 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||||||||| || || || | || || | |||||| ||||| || Sbjct 34848 CTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAACTGCTTCCCAGCAAA 34789 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| |||||||| || | ||| | | |||||||||| ||| |||| | ||| | Sbjct 34788 GATGAGACGCTGCTGATCCGGTGGAATACCCTCCTTGTCC-TGAATTTTAGCTTTCACAT 34730 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || |||| ||||| || | ||||| || || || || || |||| Sbjct 34729 TGTCAATGGTATCCGAGCTC---TCCACCTCCAAAGTGATCGTCTTCCCAGTCAGGGTCT 34673 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 34672 TCACAAAGATCTGCAT 34657 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | || | ||||||||||| || ||||| || |||||||| || || Sbjct 34655 CCACCTCTCAGCCGAAGCACCAAATGCAGGGTCGATTCCTTCTGGATATTGTAGTCGGCG 34596 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| | || || | ||||| || || || || || ||||||||||| | || Sbjct 34595 AGAGTCCTTCCATCCTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGG 34536 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || ||||||||| ||| | || | ||||| ||| | | | ||||| |||| | Sbjct 34535 ATGCCTTCCTTGTCC-TGAATCTTGGCTTTGA-CGTTGTCAATGGTGTCGGAGCTC---T 34481 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||| || || || || | |||||| |||||||||||||| Sbjct 34480 CGACCTCCAGAGTGATTGTCTTTCCTGTCAACGTCTTGACAAAGATTTGCAT 34429 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| |||||||| | || ||||| || || || ||||| Sbjct 52429 TCCTTCTGGATGTTGTAATCAGCGAGAGTCCGGCCATCCTCTAGTTGTTTTCCGGCGAAG 52370 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| | |||||||| | ||| | || || |||||| ||| || |||| ||| Sbjct 52369 ATGAGCCTTTGCTGGTCCGGTGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGA-CGTT 52311 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| || || || | |||||||| || || ||||| || || Sbjct 52310 GTCAATGGTGTCGGAGCTC---TCGACCTCCAAAGTGATGGTCTTTCCGGTTAGGGTTTT 52254 Query 42194 TACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 52253 CACAAAGATCTGCAT 52239 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | || | ||||||||||| || ||||| || |||||||| || || Sbjct 52921 CCACCTCTCAGCCGAAGCACCAAATGCAGGGTCGATTCCTTCTGGATATTGTAGTCGGCG 52862 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| | || || | ||||| || || || || || ||||||||||| | || Sbjct 52861 AGAGTCCTTCCATCCTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGG 52802 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || ||||||||| ||| | || | ||||| ||| | | | ||||| |||| | Sbjct 52801 ATGCCTTCCTTGTCC-TGAATCTTGGCTTTGA-CGTTGTCAATGGTGTCGGAGCTC---T 52747 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||| || || || || | |||||| |||||||||||||| Sbjct 52746 CGACCTCCAGAGTGATTGTCTTTCCTGTCAACGTCTTGACAAAGATTTGCAT 52695 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || ||||||||||| || || ||||| |||| || | || || |||||||| Sbjct 34391 TCCTTCTGGATATTGTAATCGGCAAGGGTCCGACCGTCTTCCAATTGTTTTCCAGCGAAG 34332 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | || | | ||||||||| ||| || ||||| ||| Sbjct 34331 ATCAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 34273 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| || || || | || ||||| || || || || ||||| Sbjct 34272 GTCGATGGTGTCGGAGCTC---TCAACTTCTAGGGTTATGGTCTTTCCGGTGAGAGTCTT 34216 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 34215 CACGAAGATTTGCAT 34201 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||||||||| || || || | || || | |||||| ||||| || Sbjct 53114 CTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAACTGCTTCCCAGCAAA 53055 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| |||||||| || | ||| | | |||||||||| ||| | || | ||| | Sbjct 53054 GATGAGGCGCTGCTGATCAGGTGGAATACCCTCCTTGTCC-TGAATCTTAGCTTTCACAT 52996 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || |||| ||||| || | ||||| || || || || || |||| Sbjct 52995 TGTCAATGGTATCCGAGCTC---TCCACCTCCAGAGTGATCGTCTTCCCAGTCAGGGTCT 52939 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||| ||||| Sbjct 52938 TCACGAAGATCTGCAT 52923 >seq3 Length=26737297 Score = 100 bits (110), Expect = 3e-16 Identities = 150/209 (72%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| ||| ||||| ||||| ||||||||||| ||||||| | || || ||||| Sbjct 2107019 ATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGCAAGAGTCCTACCATCCTCCAGCTG 2106960 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| ||||||||||| || | |||||| || | || | | ||| |||||| || | | Sbjct 2106959 CTTTCCAGCGAATATAAGCCTCTGCTGATCAGGGGGAATACCCTCTTTGTCC-TGTATCT 2106901 Query 42125 TTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 42180 | || |||| | | | || || ||| ||||| || | ||||||||||| | Sbjct 2106900 TAGTCTTGACATTGTCAATTGTATCAGAACTC---TCCACCTCAAGGGTGATGGTTTTTC 2106844 Query 42181 CCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || || ||||| ||||| || |||||| Sbjct 2106843 CAGTCAGGGTCTTAACAAAAATCTGCATT 2106815 Score = 100 bits (110), Expect = 3e-16 Identities = 150/209 (72%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| ||| ||||| ||||| ||||||||||| ||||||| | || || ||||| Sbjct 2755435 ATGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGCAAGAGTCCTACCATCCTCCAGCTG 2755494 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| ||||||||||| || | |||||| || | || | | ||| |||||| || | | Sbjct 2755495 CTTTCCAGCGAATATAAGCCTCTGCTGATCAGGGGGAATACCCTCTTTGTCC-TGTATCT 2755553 Query 42125 TTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 42180 | || |||| | | | || || ||| ||||| || | ||||||||||| | Sbjct 2755554 TAGTCTTGACATTGTCAATTGTATCAGAACTC---TCCACCTCAAGGGTGATGGTTTTTC 2755610 Query 42181 CCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || || ||||| ||||| || |||||| Sbjct 2755611 CAGTCAGGGTCTTAACAAAAATCTGCATT 2755639 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || || || | || | |||||| ||| |||||| ||||| || || ||||| Sbjct 2106814 CCACCCCTCAACCGAAGGACAAGATGCAAGGTGGACTCCTTCTGAATGTTATAGTCAGCA 2106755 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || | ||| || ||||||||||| |||| ||| ||||| | ||| Sbjct 2106754 AGGGTCCTACCATCCTCCAACTGTTTTCCAGCGAATATAAGTCTCTGTTGGTCAGGTGGG 2106695 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | |||||||||| || || |||| | | | || || |||| ||| Sbjct 2106694 ATTCCCTCCTTGTCCTGTATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTC---TCC 2106638 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || || || ||||| || || || || ||||| |||||||| Sbjct 2106637 ACCTCAAGGGTAATAGTCTTGCCAGTAAGAGTTTTCACAAATATTTGCAT 2106588 Score = 82.4 bits (90), Expect = 8e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| || | | |||||||| | || || || || |||||||| || || Sbjct 2106586 CCACCTCTCAACCTGAGAACCAAATGAAGGGTAGATTCTTTCTGGATATTGTAGTCTGCT 2106527 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || ||||| || ||||| || ||||| | ||||||||| | ||| Sbjct 2106526 AGTGTCCTGCCATCCTCAAGCTGTTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGTGGT 2106467 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCG---CTCGATTC 42157 | | |||||||| ||| | || | ||| | | | | |||||| ||| || Sbjct 2106466 ATCCCTTCCTTGTCT-TGAATCTTAGCTTTCACATTATCAATGGTGTCGGAACTC---TC 2106411 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| ||||||||||| || || || ||||| ||||| || ||||| Sbjct 2106410 AACCTCGAGAGTGATGGTTTTCCCAGTGAGTGTCTTCACAAATATCTGCAT 2106360 >seq12 Length=19346091 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | || | ||||||||||| || ||||| || |||||||| || || Sbjct 17399652 CCACCTCTCAGCCGAAGCACCAAATGCAGGGTCGATTCCTTCTGGATATTGTAGTCGGCG 17399593 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| | || || | ||||| || || || || || ||||||||||| | || Sbjct 17399592 AGAGTCCTTCCATCCTCCAATTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGAGGG 17399533 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || ||||||||| ||| | || | ||||| ||| | | | ||||| |||| | Sbjct 17399532 ATGCCTTCCTTGTCC-TGAATCTTGGCTTTGA-CGTTGTCAATGGTGTCGGAGCTC---T 17399478 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||| || || || || | |||||| |||||||||||||| Sbjct 17399477 CGACCTCCAGAGTGATCGTCTTTCCTGTCAACGTCTTGACAAAGATTTGCAT 17399426 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || ||||||||||| || || ||||| |||| || | || || |||||||| Sbjct 17382140 TCCTTCTGGATATTGTAATCGGCAAGGGTCCGACCGTCTTCCAATTGTTTTCCAGCGAAG 17382081 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | || | | ||||||||| ||| || ||||| ||| Sbjct 17382080 ATCAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 17382022 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| || || || | || ||||| || || || || ||||| Sbjct 17382021 GTCGATGGTGTCGGAGCTC---TCAACTTCTAGGGTTATGGTCTTTCCGGTGAGAGTCTT 17381965 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 17381964 GACGAAGATTTGCAT 17381950 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||||||||| || || || | || || | |||||| ||||| || Sbjct 17382504 CTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAACTGCTTCCCAGCAAA 17382445 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || |||||||| || | || | | |||||||||| ||| |||| | ||| | Sbjct 17382444 GATAAGACGCTGCTGATCCGGCGGAATACCCTCCTTGTCC-TGAATTTTAGCTTTCACAT 17382386 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || |||| ||||| || | ||||| || || || || || |||| Sbjct 17382385 TGTCAATGGTATCTGAGCTC---TCCACCTCCAAAGTGATCGTCTTCCCAGTCAGGGTCT 17382329 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 17382328 TCACAAAGATCTGCAT 17382313 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || |||||||| || |||||||| | || ||||| || || || |||||| Sbjct 17381912 TCCTTCTGGATGTTGTAATCGGCGAGAGTCCGGCCATCCTCTAGTTGTTTGCCGGCGAAT 17381853 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| | |||||||| | ||| | | || |||||| ||| || |||| | Sbjct 17381852 ATGAGCCTTTGCTGGTCCGGTGGAATACCTTCTTTGTCCTGGATCTTGGCCTTGACGTTA 17381793 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| |||| || || || | |||||||| ||||| ||||| || || Sbjct 17381792 TCAATGGTGTCAGAGCTC---TCGACCTCCAAAGTGATGGTCTTGCCAGTTAGGGTTTTC 17381736 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 17381735 ACGAAGATCTGCAT 17381722 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||| |||||||| | || ||||| || || || || || Sbjct 17399160 TCCTTCTGGATGTTGTAATCAGCGAGAGTCCGGCCATCCTCTAGTTGTTTTCCGGCAAAG 17399101 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| | |||||||| | ||| | | || |||||| ||| || |||| ||| Sbjct 17399100 ATGAGCCTTTGCTGGTCCGGTGGAATACCTTCTTTGTCCTGGATCTTGGCCTTGA-CGTT 17399042 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| || || || | |||||||| ||||| || || || || Sbjct 17399041 GTCAATGGTGTCGGAGCTC---TCGACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTTTT 17398985 Query 42194 TACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 17398984 CACAAAGATCTGCAT 17398970 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || ||||||||||| || || || || | || || | ||||| || ||||| Sbjct 17399388 TCCTTCTGGATATTGTAATCTGCAAGGGTTCGACCATCTTCCAATTGCTTTCCCGCGAAG 17399329 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||| | || | | ||||||||| ||| || ||||| ||| Sbjct 17399328 ATCAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 17399270 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| || || || | || ||||| || || || || ||||| Sbjct 17399269 GTCGATGGTGTCGGAGCTC---TCAACTTCTAGGGTTATGGTCTTTCCGGTGAGAGTCTT 17399213 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 17399212 GACGAAGATTTGCAT 17399198 >seq4 Length=30445767 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| | |||| |||||| |||| || ||||| || || ||||| Sbjct 3595626 CTCCTTCTGAATGTTGTAGTTGGCCAAAGTCCGGCCGTCCTCCAGCTGTTTTCCGGCGAA 3595567 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||||||||| || || | || | | ||||||| | || | || | || ||| Sbjct 3595566 GATGAGTCGCTGTTGATCAGGAGGAATTCCTTCCTTGT-CTTGTATCTTCGCTTTCACGT 3595508 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| ||| || || || | || ||||| |||||||| || || || | Sbjct 3595507 TGTCGATGGTGTCCGACGACTCAACCTCTATGGTTATGGTCTTGCCCGTAAGGGTTTTCA 3595448 Query 42196 CAAAGATTTGCAT 42208 | || |||||||| Sbjct 3595447 CGAAAATTTGCAT 3595435 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| | |||| |||||| |||| || ||||| || || ||||| Sbjct 2276511 CTCCTTCTGAATGTTGTAGTTGGCCAAAGTCCGGCCGTCCTCCAGCTGTTTTCCGGCGAA 2276452 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||||||||| || || | | | | ||||||| | || | || | || ||| Sbjct 2276451 GATGAGTCGCTGTTGATCAGGAGAAATTCCTTCCTTGT-CTTGTATCTTCGCTTTCACGT 2276393 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| ||| || || || | || ||||| |||||||| || || || | Sbjct 2276392 TGTCGATGGTGTCCGACGACTCAACCTCTATGGTTATGGTCTTGCCCGTAAGGGTTTTCA 2276333 Query 42196 CAAAGATTTGCAT 42208 | || |||||||| Sbjct 2276332 CGAAAATTTGCAT 2276320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543180281923760