Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq421 93.3 4e-14 seq4 89.7 5e-13 seq34 86.0 7e-12 seq12 86.0 7e-12 seq6 86.0 7e-12 seq253 84.2 2e-11 >seq421 Length=83677 Score = 93.3 bits (102), Expect = 4e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 92611 CGTAGCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTC 92670 ||| |||||||||||||||| |||||||||| ||||||||||||| |||| || ||||| Sbjct 18398 CGTCGCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGCGGGTTT 18339 Query 92671 AAATCCCA-CTCC 92682 |||||||| |||| Sbjct 18338 AAATCCCATCTCC 18326 >seq4 Length=30445767 Score = 89.7 bits (98), Expect = 5e-13 Identities = 62/69 (90%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||||| ||||||||| ||||||||||||| |||| | ||||||||||| Sbjct 17941005 GCGGGGTAGAGCAGCTTGGTAGCTCGTAAGGCTCATAACCTTGAGGTCATGGGTTCAAAT 17940946 Query 92675 CCCA-CTCC 92682 |||| |||| Sbjct 17940945 CCCATCTCC 17940937 >seq34 Length=344078 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 ||| |||||||||||| |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 26897 GCGAGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 26838 Query 92675 CCCA-CTCC 92682 |||| |||| Sbjct 26837 CCCATCTCC 26829 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||||| ||||||| || ||||||||||||| |||| | |||||||||| Sbjct 188693 GCGGGGTAGAGCAGCTTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 188752 Query 92675 CCCA 92678 |||| Sbjct 188753 CCCA 188756 >seq12 Length=19346091 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 |||||||||||||||| |||||||||| ||||||||||||| ||| | |||||||||| Sbjct 2521020 GCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTAAGGTCACGGGTTCAAAT 2521079 Query 92675 CCCA-CTCC 92682 |||| |||| Sbjct 2521080 CCCATCTCC 2521088 >seq6 Length=25259912 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 ||| |||||||||||| |||||||||| ||||||||||||| |||| | |||||||||| Sbjct 6741229 GCGAGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAAT 6741170 Query 92675 CCCA-CTCC 92682 |||| |||| Sbjct 6741169 CCCATCTCC 6741161 >seq253 Length=128870 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 92611 CGTAGCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTC 92670 ||| | ||| |||||||||| |||||||||| ||||||||||||| |||| ||||||| Sbjct 41566 CGTCGTGGGATAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTTGTGGGTTT 41507 Query 92671 AAATCCCA-CTCC 92682 |||||||| |||| Sbjct 41506 AAATCCCATCTCC 41494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526566876503280