Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq9 300 2e-76 seq4 129 6e-25 seq12 127 2e-24 seq38 123 2e-23 seq1 123 2e-23 seq3 109 5e-19 >seq9 Length=25348792 Score = 300 bits (332), Expect = 2e-76 Identities = 616/900 (68%), Gaps = 27/900 (3%) Strand=Plus/Minus Query 132603 TTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAG 132662 ||| ||||| || || ||| | ||||| || ||||| || || |||| ||| || || || Sbjct 24571636 TTTCTGATACTCTCCGACCCTCTTCTCGAAGAAATTTGTCTTCCCCTGCAACGATATCAG 24571577 Query 132663 CGTCATAAAATCCAAGGGGTTGGCTGTG--TTGTAGTGCTTG--GTGCCGATCAGGTCGA 132718 | ||| |||| || ||||| ||| ||||| ||| || || || | Sbjct 24571576 CTCCATCCAATCAAATGGGTT--CTGAACATTGTAAATCTTCCCGTACCCCAAAGCAC-- 24571521 Query 132719 CGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCA 132778 | |||| ||| || ||||| ||||| ||||| || ||| || | || | |||| Sbjct 24571520 CCAGCAACCTATCAGCCACAAACTCAATGTACTGGCTCATCAGATCACCGTTCATCCCCA 24571461 Query 132779 GCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTG 132837 |||| |||| ||||| ||| ||| | || | ||| || | ||||||||| Sbjct 24571460 CCAGA-GCACACGGCAACGCGTCGCACACGAACTCTCTCTCTATATCAACCGCGTCGCGA 24571402 Query 132838 ACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAA 132897 |||||| || |||| || || ||||| || | | || || || | | |||||| Sbjct 24571401 ACGATTCCCTTAACTCGTTCCTCGCTCAGCTTCTTCCTCATCAGCGTGTAAAGCAAGCAC 24571342 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || |||||||| ||||| |||||||| | || || | ||||| |||||| | ||| Sbjct 24571341 GCGAAGTCGCAGTGCAAACCCTCGTCTCGCGAGATCAACTCGTTCGAGAAAGTGAGCCCG 24571282 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| | ||||| || || ||||||||||| ||| ||| || ||||||||||| | Sbjct 24571281 GGCATCAACCCGCGCTTCTTCAGCCAAAATATCGCGCAGAAGCTCCCCGAAAAGAAAATC 24571222 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 ||||| ||| |||||||| |||| ||||| ||||| | ||| ||| | ||||| Sbjct 24571221 CCCTCCACGCAAGCGAAAGCAACCAAACGCTCCGCGAAC---GATTCGGTGCCGTCGATC 24571165 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGCGTTCA 133135 || || || |||||||||||| ||||| | || || || | || |||||||| | | Sbjct 24571164 CACCGGAGGGCCCATTCGGCC--TTCTTGGCCACACAAGGGACGGTCTCGATGGCATGGA 24571107 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCG---ATGAGGGTCGAATACA 133192 | | ||| ||||| ||| | | ||||| ||| | |||| | ||||| Sbjct 24571106 AAAGCCGGTTCTTCTCGACCGGGTCTTTGATATAGGTTTCGAGCAAGAGGCT---ATACA 24571050 Query 133193 TTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACCGCGCCTCGACC 133251 |||| ||||| | ||||| ||||| || || ||||| || ||||| || ||||| | Sbjct 24571049 TTTCGGAGTGGATATTCTCTATGGCAATCTGGAAGCCATAGAAAGC-GCGAGCCTCTGCG 24570991 Query 133252 ACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCG 133311 ||||| || || | ||| | | || | ||||| || ||||||||||| ||| Sbjct 24570990 ACCTGAACCTCCTTCATGAACCTCCCGGCGAGATTCTCCAAAACGATGCCGTCTGAGGCA 24570931 Query 133312 GCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAG 133371 || || || || ||||| ||| ||||| || ||||| | | | | | |||||| Sbjct 24570930 GCAAAGAAAGCGAGCACATGCGAAATGAAGTGCTTCTCGTCGGGGGTTAGGTTTTCCCAG 24570871 Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431 | || |||| || ||||| ||||||||| ||||||| || || ||||||||||| Sbjct 24570870 TGACGAACATCCTGAGAGAGGTCGACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCTTTC 24570811 Query 133432 TTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACA-AACCGGCGGGGGTT 133490 |||||||| ||| || | || ||||| || ||||| || ||| |||||| ||||| Sbjct 24570810 TTGTACATTTCCCAGATTTGCGGGTATTGGATCGGAAACAT-ACAGAACCGGTCTGGGTT 24570752 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || ||||| || || || || | || |||||| | Sbjct 3789686 AAAGATGCAGATCTTCGTGAAAACCCTGACGGGTAAGACAATAACGCTAGAGGTCGAGTC 3789745 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | | || | || |||| ||||| || ||||| || | || Sbjct 3789746 GTCGGACACCATCGATAATGTGAAGGCGAAGATCCAAGACAAGGAAGGAATACCGCCGGA 3789805 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| |||||||| || | ||| || || || ||||| || | | ||||| ||| || Sbjct 3789806 CCAGCAGCGGCTGATATTCGCAGGGAAGCAACTGGAAGATGGCAGAACCCTAGCCGATTA 3789865 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| |||| || ||| |||| ||||| Sbjct 3789866 CAACATCCAGAAGGAGTCGACCCTCCATCTGGTTCTGCG 3789904 >seq4 Length=30445767 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || |||||||| ||||| ||| | || || ||| | | Sbjct 3595435 ATGCAAATTTTCGTGAAAACCCTTACGGGCAAGACCATAACCATAGAGGTTGAGTCGTCG 3595494 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || || | ||||| || |||||||| | || || Sbjct 3595495 GACACCATCGACAACG-TGAAAGCGAAGATACAAGACAAGGAAGGAATTCCTCCTGATCA 3595553 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| || ||||||||||| |||| || || | | ||||||| Sbjct 3595554 ACAGCGACTCATCTTCGCCGGAAAACAGCTGGAGGACGGCCGGACTTTGGCCAACTACAA 3595613 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| |||| || ||| |||| || || | || ||||| Sbjct 3595614 CATTCAGAAGGAGTCGACTCTTCATCTGGTTCTACGGCTCAGGGGCGG 3595661 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || |||||||| ||||| ||| | || || ||| | | Sbjct 2276320 ATGCAAATTTTCGTGAAAACCCTTACGGGCAAGACCATAACCATAGAGGTTGAGTCGTCG 2276379 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || || | ||||| || |||||| | | || || Sbjct 2276380 GACACCATCGACAACG-TGAAAGCGAAGATACAAGACAAGGAAGGAATTTCTCCTGATCA 2276438 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| || ||||||||||| |||| || || | | ||||||| Sbjct 2276439 ACAGCGACTCATCTTCGCCGGAAAACAGCTGGAGGACGGCCGGACTTTGGCCAACTACAA 2276498 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| |||| || ||| | || || || | || ||||| Sbjct 2276499 CATTCAGAAGGAGTCGACTCTTCATCTAGTTCTACGGCTCAGGGGCGG 2276546 >seq12 Length=19346091 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| |||||||| | || |||||| | | Sbjct 17381722 ATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACCATCACTTTGGAGGTCGAGAGCTCT 17381781 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| |||||||| || ||||| | ||||| Sbjct 17381782 GACACCATTGATAACG-TCAAGGCCAAGATCCAGGACAAAGAAGGTATTCCACCGGACCA 17381840 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | ||| |||||||| || || || | || || ||| ||| ||||| Sbjct 17381841 GCAAAGGCTCATATTCGCCGGCAAACAACTAGAGGATGGCCGGACTCTCGCCGATTACAA 17381900 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| |||| || ||| |||| || ||| Sbjct 17381901 CATCCAGAAGGAATCGACCCTCCATCTGGTCCTTCGT 17381937 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| ||||| |||||||| | || |||||| | || Sbjct 17398970 ATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGAGCTCC 17399029 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| |||||||| || ||||| | ||||| Sbjct 17399030 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAAGAAGGTATTCCACCGGACCA 17399088 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | || || ||||| || || || | || || ||| || ||||| Sbjct 17399089 GCAAAGGCTCATCTTTGCCGGAAAACAACTAGAGGATGGCCGGACTCTCGCTGATTACAA 17399148 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| |||| || ||| |||| || ||| Sbjct 17399149 CATCCAGAAGGAATCGACCCTCCATCTGGTCCTTCGT 17399185 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || ||| | || || || || ||||| | || |||||| | || Sbjct 17399426 ATGCAAATCTTTGTCAAGACGTTGACAGGAAAGACGATCACTCTGGAGGTCGAGAGCTCC 17399485 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || || | ||||| || || || || | ||||| Sbjct 17399486 GACACCATTGACAACG-TCAAAGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGGACCA 17399544 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| || |||| || | | || ||| ||||||||| Sbjct 17399545 GCAGCGTCTGATCTTTGCCGGCAAGCAATTGGAGGATGGAAGGACTCTCGCCGACTACAA 17399604 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| |||| |||||||||||||| || ||||||| ||| Sbjct 17399605 TATCCAGAAGGAATCGACCCTGCATTTGGTGCTTCGGCTGAGAGGTGGC 17399653 >seq38 Length=323574 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| |||||||| | || |||||| | | Sbjct 33591 ATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACCATCACTTTGGAGGTCGAGAGCTCT 33650 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| |||||||| || ||||| | ||||| Sbjct 33651 GACACCATTGATAACG-TCAAGGCCAAGATCCAGGACAAAGAAGGTATTCCACCGGACCA 33709 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | ||| || ||||| || || || | || || ||| ||| ||||| Sbjct 33710 GCAAAGGCTCATCTTCGCCGGAAAACAACTAGAGGATGGCCGGACTCTCGCCGATTACAA 33769 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| |||| || ||| |||| || ||| Sbjct 33770 CATCCAGAAGGAATCGACCCTCCATCTGGTCCTTCGT 33806 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| |||||||| | || |||||| | | Sbjct 33973 ATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACCATCACTTTGGAGGTCGAGAGCTCT 34032 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| |||||||| || ||||| | ||||| Sbjct 34033 GACACCATTGATAACG-TCAAGGCCAAGATCCAGGACAAAGAAGGTATTCCACCGGACCA 34091 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | ||| || ||||| || || || | || || ||| ||| ||||| Sbjct 34092 GCAAAGGCTCATCTTCGCCGGAAAACAACTAGAGGATGGCCGGACTCTCGCCGATTACAA 34151 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| |||| || ||| |||| || ||| Sbjct 34152 CATCCAGAAGGAATCGACCCTCCATCTGGTCCTTCGT 34188 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| ||||| || || || ||||| || || | || |||||| | | Sbjct 33362 AATGCAGATCTTCGTCAAAACCCTAACCGGTAAAACTATTACTCTGGAGGTCGAGAGCTC 33421 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | | |||| | || | || |||| ||||| || || ||||| | || | Sbjct 33422 CGACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGATC 33480 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| ||||||| | ||| || ||||| || || |||| || || ||| ||| |||| Sbjct 33481 AGCAGAGGCTCATCTTCGCCGGAAAACAACTTGAGGACGGCCGGACTCTCGCCGATTACA 33540 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| |||||| |||| || ||| |||| || ||| || | || || Sbjct 33541 ACATCCAGAAGGAATCGACCCTCCATCTGGTCCTTCGTCTGCGTGGTGG 33589 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || ||| | || || || || ||||| | || |||||| | || Sbjct 34429 ATGCAAATCTTTGTCAAGACGTTGACAGGAAAGACAATCACTCTGGAGGTCGAGAGCTCC 34488 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || || | ||||| || || || || | ||||| Sbjct 34489 GACACCATTGACAACG-TCAAAGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGGACCA 34547 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| || |||| || | | || ||| ||||||||| Sbjct 34548 GCAGCGTCTGATCTTTGCCGGCAAGCAATTGGAGGATGGAAGGACTCTCGCCGACTACAA 34607 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| |||| |||||||||||||| || ||||||| || Sbjct 34608 TATCCAGAAGGAATCGACCCTGCATTTGGTGCTTCGGCTGAGAGGTGG 34655 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || ||| | || || || || ||||| | || |||||| | || Sbjct 52695 ATGCAAATCTTTGTCAAGACGTTGACAGGAAAGACAATCACTCTGGAGGTCGAGAGCTCC 52754 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || || | ||||| || || || || | ||||| Sbjct 52755 GACACCATTGACAACG-TCAAAGCCAAGATTCAGGACAAGGAAGGCATCCCTCCGGACCA 52813 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| || |||| || | | || ||| ||||||||| Sbjct 52814 GCAGCGTCTGATCTTTGCCGGCAAGCAATTGGAGGATGGAAGGACTCTCGCCGACTACAA 52873 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| |||| |||||||||||||| || ||||||| || Sbjct 52874 TATCCAGAAGGAATCGACCCTGCATTTGGTGCTTCGGCTGAGAGGTGG 52921 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || || |||||||| | || |||||| | || Sbjct 52239 ATGCAGATCTTTGTGAAAACCCTAACCGGAAAGACCATCACTTTGGAGGTCGAGAGCTCC 52298 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| |||||||| || ||||| | ||||| Sbjct 52299 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCACCGGACCA 52357 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | ||| || ||||| || || || | || || ||| || ||||| Sbjct 52358 GCAAAGGCTCATCTTCGCCGGAAAACAACTAGAGGATGGCCGGACTCTCGCTGATTACAA 52417 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| |||| || ||| |||| || ||| Sbjct 52418 CATCCAGAAGGAATCGACCCTCCATCTGGTCCTTCGT 52454 >seq1 Length=42390363 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| | || ||||| |||||||| |||| |||||| | | Sbjct 13907833 ATGCAAATCTTCGTCAAAACCTTAACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCT 13907774 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | |||| || |||| |||||||||||||||||| | || || Sbjct 13907773 GACACCATCGACAACG-TCAAAGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGATCA 13907715 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | ||| || || || || || |||| || ||||| ||||||||| Sbjct 13907714 ACAAAGATTGATCTTCGCAGGAAAGCAACTAGAGGACGGTCGTACCCTAGCCGACTACAA 13907655 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || ||| |||| || ||| Sbjct 13907654 TATCCAGAAGGAGTCAACCCTCCATCTGGTTCTCCGT 13907618 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| | || |||||| | || Sbjct 31833475 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCC 31833534 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || || || | ||||| Sbjct 31833535 GACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCAGACCA 31833593 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | ||| ||||||||||| || || | ||| |||||| || ||||| Sbjct 31833594 GCAGAGGCTCATCTTCGCTGGCAAACAGCTCGAGGATGGGCGTACCCTCGCTGATTACAA 31833653 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| |||| || ||| | || || ||| Sbjct 31833654 TATCCAGAAGGAGTCGACCCTCCATCTCGTCCTTCGT 31833690 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || ||||| ||||| || |||| |||||| || Sbjct 31833247 ATGCAAATCTTCGTCAAAACCCTAACCGGCAAGACCATAACTCTCGAGGTCGAGAGTTCC 31833306 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| ||||| ||||| | || || Sbjct 31833307 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCA 31833365 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| || || ||||| || |||| || |||||| || ||||| Sbjct 31833366 GCAGAGGTTGATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGAACCCTCGCAGATTACAA 31833425 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||| |||| || ||| Sbjct 31833426 CATCCAGAAGGAGTCAACCCTCCATCTGGTCCTCCGT 31833462 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || ||||| ||| |||| || || | | Sbjct 31833703 ATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACCATAACCCTCGAAGTGGAAAGCTCG 31833762 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | ||||||| ||||| ||||| |||||| | ||||| Sbjct 31833763 GACACGATTGATAATG-TCAAGGCCAAAATCCAAGACAAGGAGGGTATTCCCCCGGACCA 31833821 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || || ||||| || || | | ||||| || ||||| Sbjct 31833822 GCAGAGGTTGATATTTGCTGGAAAGCAGCTTGAGGATGGTAGGACCCTTGCGGATTACAA 31833881 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| |||| || ||| | ||||||||| | || || ||| Sbjct 31833882 CATCCAGAAGGAGTCGACCCTCCATCTTGTGCTGCGTCTCAGGGGTGGC 31833930 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || ||||| || |||||||| || | || ||||| | Sbjct 34329591 AATGCAAATCTTTGTCAAGACCCTCACCGGAAAAACCATTACTCTGGAGGTCGAAAGTTC 34329650 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | |||| | || | || || | ||||| ||||| || || | |||| Sbjct 34329651 CGACACTATTGACAACG-TGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCGGACC 34329709 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| ||||||| | ||| || |||||||| || |||| | || || ||||||| Sbjct 34329710 AGCAGAGGCTCATCTTCGCCGGAAAACAGCTTGAGGACGGCAGGACTCTTGCTGACTACA 34329769 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| |||||| | || || || |||||||| ||| Sbjct 34329770 ACATCCAGAAGGAATCCACCCTCCACTTGGTGCTTCGT 34329807 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | || || ||||||||||| | || || || | | Sbjct 34330047 AATGCAGATTTTCGTTAAGACTTTGACAGGGAAAACCATCACTTTGGAGGTTGAAAGCTC 34330106 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | || | || || | ||||| |||||||||||| | || || Sbjct 34330107 GGACACCATTGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGAATTCCCCCAGATCA 34330166 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||||| || || | | | ||||| |||||||| Sbjct 34330167 GCAGAGGCTTATCTTCGCTGGTAAGCAGCTCGAGGATGGGAGGACCCTTGCTGACTACAA 34330226 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||| || ||||| |||| ||||| ||||| ||| Sbjct 34330227 CATTCAGAAGGAGTCGACCCTGCACTTGGTTCTG 34330260 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || || |||||| | || || || || Sbjct 34329820 ATGCAAATCTTCGTCAAGACCCTTACCGGAAAGACGATCACCCTGGAGGTGGAAAGTTCC 34329879 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | ||||||| || || || ||||| || | ||||| Sbjct 34329880 GATACCATTGACAATGTCAAGGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGACCAG 34329939 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | ||| || || ||||| || || | | ||||| ||||||||| Sbjct 34329940 CAGAGGCTCATCTTCGCTGGTAAGCAGCTTGAGGATGGAAGGACCCTTGCTGACTACAAC 34329999 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| |||| || || |||||||| ||| Sbjct 34330000 ATCCAGAAGGAGTCGACCCTCCACTTGGTGCTCCGT 34330035 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| ||||| ||||| || |||||| |||| || || | || Sbjct 34329364 ATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAGGTGGAAAGCTCC 34329423 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| | || || | || || || || || || | ||||| Sbjct 34329424 GACACCATCGATAATGTTAAGGCCAAGATTCAAGATAAGGAAGGCATCCCACCAGACCAG 34329483 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || |||| || | ||| || || ||||| || |||| || || ||| ||||||||| Sbjct 34329484 CAAAGGCTGATCTTCGCCGGGAAGCAGCTCGAAGACGGCCGTACACTCGCTGACTACAAC 34329543 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || || |||| || ||| Sbjct 34329544 ATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGT 34329579 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || ||||||||| | || || ||| || Sbjct 34330276 ATGCAGATTTTTGTGAAGACTCTGACCGGGAAGACCATCACCTTGGAGGTTGAGAGTTCC 34330335 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | |||||| | ||||| || || || || | ||||| Sbjct 34330336 GACACCATTGACAATGTAAAGGCAAAAATTCAGGACAAGGAAGGCATCCCTCCAGACCAG 34330395 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| |||| ||| ||||| ||||| || || | | | || || || |||||| Sbjct 34330396 CAGAGGCTGATTTTCGCTGGCAAGCAGCTTGAGGATGGGAGGACTCTGGCGGATTACAAC 34330455 Query 38424 ATCCAAAAGGAAGCGACGCTGCA 38446 ||||| ||||| | || ||||| Sbjct 34330456 ATCCAGAAGGAGTCTACCCTGCA 34330478 >seq3 Length=26737297 Score = 109 bits (120), Expect = 5e-19 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 38223 TAAGTGAAACTCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATC 38282 |||||||| || | || | ||||| ||||| || || || ||||| || ||||||||| Sbjct 2106341 TAAGTGAA--TCATGCAACAGATGCAGATATTTGTGAAGACACTCACTGGGAAAACCATC 2106398 Query 38283 ACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAA 38342 || |||| || ||| |||||| | | | | | |||| || || | ||||| Sbjct 2106399 ACTCTCGAGGTTGAGAGTTCCGACACCATTGATAATGTGAAAGCTAAGATTCAAGACAAG 2106458 Query 38343 GAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402 || || || || | ||||| ||| ||||||| | || || |||||||| || || | Sbjct 2106459 GAAGGGATACCACCTGACCAGCAGAGGCTCATCTTTGCTGGGAAACAGCTTGAGGATGGC 2106518 Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462 | || || |||||||| ||||| || ||| | || || |||||||| || | ||| Sbjct 2106519 AGGACACTAGCAGACTACAATATCCAGAAAGAATCTACCCTTCATTTGGTTCTCAGGTTG 2106578 Query 38463 AGAGGCGGC 38471 ||||| ||| Sbjct 2106579 AGAGGTGGC 2106587 Score = 109 bits (120), Expect = 5e-19 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 38223 TAAGTGAAACTCTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATC 38282 |||||||| || | || | ||||| ||||| || || || ||||| || ||||||||| Sbjct 2756113 TAAGTGAA--TCATGCAACAGATGCAGATATTTGTGAAGACACTCACTGGGAAAACCATC 2756056 Query 38283 ACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAA 38342 || ||| || ||| |||||| | | | | | |||| || || | ||||| Sbjct 2756055 ACTCCCGAGGTTGAGAGTTCCGACACCATTGATAATGTGAAAGCTAAGATTCAAGACAAG 2755996 Query 38343 GAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAG 38402 || || || || | ||||| ||| ||||||| | || || |||||||| || || | Sbjct 2755995 GAAGGGATACCACCTGACCAGCAGAGGCTCATCTTTGCTGGGAAACAGCTTGAGGATGGC 2755936 Query 38403 CGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTG 38462 | || || |||||||||||||| || ||| | || || |||||||| || | ||| Sbjct 2755935 AGGACACTAGCAGACTACAACATCCAGAAAGAATCTACCCTTCATTTGGTTCTTAGGTTG 2755876 Query 38463 AGAGGCGGC 38471 ||||| ||| Sbjct 2755875 AGAGGTGGC 2755867 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || |||||||| || || | || || ||| | Sbjct 2107500 ATGCAAATTTTTGTGAAAACTCTGACTGGCAAAACAATTACTCTTGAGGTGGAGAGTTCG 2107559 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || || | || || Sbjct 2107560 GACACAATCGACAATGTGAAGGCGAAAATCCAAGACAAAGAGGGGATCCCTCCTGATCAG 2107619 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| |||| || ||||| || ||||| || | |||||| || |||||| ||| Sbjct 2107620 CAGAGGCTTATTTTTGCCGGCAAGCAACTGGAGGATGGGCGCACTCTGGCCGACTATAAC 2107679 Query 38424 ATCCAAAAGGA 38434 ||||||||||| Sbjct 2107680 ATCCAAAAGGA 2107690 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || |||||||| || || | || || ||| | Sbjct 2754954 ATGCAAATTTTTGTGAAAACTCTGACTGGCAAAACAATTACTCTTGAGGTGGAGAGTTCG 2754895 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||||||| ||||||||||| || || | || || Sbjct 2754894 GACACAATCGACAATGTGAAGGCGAAAATCCAAGACAAAGAGGGGATCCCTCCTGATCAG 2754835 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| |||| || ||||| || ||||| || | |||||| || ||||| ||| Sbjct 2754834 CAGAGGCTTATTTTTGCCGGCAAGCAACTGGAGGATGGGCGCACTCTGGCTGACTATAAC 2754775 Query 38424 ATCCAAAAGGA 38434 ||||||||||| Sbjct 2754774 ATCCAAAAGGA 2754764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500142858405760