Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 1e-11 >seq4 Length=30445767 Score = 86.0 bits (94), Expect = 1e-11 Identities = 66/78 (85%), Gaps = 3/78 (4%) Strand=Plus/Minus Query 324417 ATTGCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGT 324476 || |||| ||||||||| |||||||| | ||||||||||||||||||||| || ||| Sbjct 17941008 ATCGCGGGGTAGAGCAGCTTGGTAGCTCGTAAGGCTCATAACCTTGAGGTCATG---GGT 17940952 Query 324477 TCGAATCCCACCTCCGCA 324494 || ||||||| ||||||| Sbjct 17940951 TCAAATCCCATCTCCGCA 17940934 Score = 84.2 bits (92), Expect = 5e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 150700 TCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGA 150759 ||| || || | ||| ||||||||||||||| ||||||||||| || | ||||| Sbjct 8136665 TCGGGGAGAGTTGCGTTGCATCGGTGCAACAACTCTTGATGAATATCGCAAGTATATTGA 8136606 Query 150760 AAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACCGACACTTGA 150819 |||||| ||||||| ||||||||||| | ||| || ||| | |||| || |||| Sbjct 8136605 GAAAGATCCAGCACTTGAGCGTCGTTTCCAACAAGTTTATGTTGATCAACCTACTGTTGA 8136546 Query 150820 AGAAAC 150825 ||| || Sbjct 8136545 AGATAC 8136540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147519984928922