Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq2744 147 4e-30 >seq2744 Length=3691 Score = 147 bits (162), Expect = 4e-30 Identities = 236/331 (71%), Gaps = 6/331 (2%) Strand=Plus/Minus Query 111009 CTGGGCAATGCGGTCGCCGCGATTGATGACGAACGGATTGCGGCCGTGGTTGATCAGGAT 111068 |||||| ||||| |||||||| ||||||||| || | | |||| |||| |||||| Sbjct 563 CTGGGCGATGCGTTCGCCGCGGCGGATGACGAAGGGCTCGGCGCCGATGTTGGCCAGGAT 504 Query 111069 CACCTTGATCTCGCCGCGATAGTCGCTGTCGACGGTACCGGGCGAATTCAGGACAG-TGA 111127 ||| | ||||||||||||||||||||||| ||| || |||| ||| || ||| ||| Sbjct 503 CACGCCGCACTCGCCGCGATAGTCGCTGTCGATGGTGCCCGGCGCATT-GGGGCAGATGA 445 Query 111128 TAGACG-ACTTGGCGGCGAGGCCCGAGCGCGGCCGGACTTGCAGTTCCAGGCCCGCCGGC 111186 | | || || |||||||| ||||||| ||| || || || ||| |||| Sbjct 444 T-GCCGTGTTTCAAAGCGAGGCCAGAGCGCGCCCGCACCTGGGCCTCGTACCCCAGCGGC 386 Query 111187 AGGGCGACCGTGACGCCGGTCGGGATGA-TGCCGACTTCGCCCGCAGCGATAGTAAAGGG 111245 ||||||| | | | || || || | | ||| | | |||| || | || | || Sbjct 385 AGGGCGATCTTCAGCCCCGTGGGCACCAGCGCCCGC-TGACCCGGCGCCAGGGTTATCGG 327 Query 111246 TTCATCCTCGGGGATCGCGGCACGCAAGTCCAGGCCGGCGGACCCACGGGTCTCGTAGGC 111305 | ||||||||| | ||||| |||| ||||| ||| || ||||| |||||| ||||| Sbjct 326 CTGATCCTCGGGCAAGGCGGCGCGCAGGTCCATGCCCGCCGACCCGGTGGTCTCATAGGC 267 Query 111306 TGGCAGCGGCAGGCCTTGGGCATGCTCCAGG 111336 ||||| ||||| |||| ||||||| |||| Sbjct 266 GGGCAGAGGCAGACCTTCGGCATGCGGCAGG 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895712777183880