Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 8e-13 seq256 87.8 3e-12 >seq3 Length=26737297 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || ||||| || || ||| |||| || || | Sbjct 2107273 TGCAAATTTTTGTCAAGACTTTGACGGGAAAGACCATCACTCTTGAGGTTGAGAGCTCTG 2107332 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || || || || ||| ||||| || ||||| ||||| | Sbjct 2107333 ATACGATAGACAATGTCAAGGCAAAGATCCAGGATAAGGAAGGGATACCACCTGATCAGC 2107392 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || |||||||| || || | |||||| || || || |||||||||||| Sbjct 2107393 AGAGGCTTATCTTTGCAGGAAAGCAGCTCGATGATGGCAGGACTTTGGCAGATTATAATA 2107452 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | || || ||||| ||| | ||| | ||| Sbjct 2107453 TCCAGAAGGAATCAACTTTGCATCTTGTA 2107481 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || ||||| || || ||| |||| || || | Sbjct 2755181 TGCAAATTTTTGTCAAGACTTTGACGGGAAAGACCATCACTCTTGAGGTTGAGAGCTCTG 2755122 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| || || || || ||| ||||| || ||||| ||||| | Sbjct 2755121 ATACGATAGACAATGTCAAGGCAAAGATCCAGGATAAGGAAGGGATACCACCTGATCAGC 2755062 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || |||||||| || || | |||||| || || || |||||||||||| Sbjct 2755061 AGAGGCTTATCTTTGCAGGAAAGCAGCTCGATGATGGCAGGACTTTGGCAGATTATAATA 2755002 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | || || ||||| ||| | ||| | ||| Sbjct 2755001 TCCAGAAGGAATCAACTTTGCATCTTGTA 2754973 >seq256 Length=127809 Score = 87.8 bits (96), Expect = 3e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 146126 TAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185 ||| |||||||| || || |||||||||||| | |||||||| ||||| ||||| || || Sbjct 84918 TAAGGAAGGCATCCCTCCTGATCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGA 84859 Query 146186 TAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACT 146228 | |||| | |||||||||| || ||||| || |||||| Sbjct 84858 TGGACGAACTCTTGCAGATTATAACATCCAAAAGGAGTCGACT 84816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786119338113880