Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 6e-12 >seq4 Length=30445767 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||| ||| | | ||||| || ||||||||||||| | || || || || || Sbjct 3595644 AACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTTGGCCAAAGTCCGGCCGTCCTC 3595585 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 |||||||| |||| |||| || ||||||||||| ||||| || ||||| || || Sbjct 3595584 CAGCTGTTTTCCGGCGAAGATGAGTCGCTGTTGATCAGGAGGAATTCCTTCCTTGTCTTG 3595525 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || ||||| | || | || || | || ||| || || | || | || || Sbjct 3595524 TATCTTCGCTTTCACGTTGTCGATGGTGTCCGACGACTCAACCTCTATGGTTATGGTCTT 3595465 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 || || || ||||| | |||||| ||||||| Sbjct 3595464 GCCCGTAAGGGTTTTCACGAAAATTTGCATGA 3595433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476582668862040