Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq9 257 2e-62 >seq9 Length=25348792 Score = 257 bits (284), Expect = 2e-62 Identities = 392/547 (72%), Gaps = 16/547 (3%) Strand=Plus/Plus Query 1455734 AACCCGAACCGCTT-TGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCA 1455792 ||||| |||| || ||| |||| || |||| |||| || || |||||||||||| | Sbjct 24570752 AACCCAGACCGGTTCTGTA-TGTTTCCGATCCAATACCCGCAAATCTGGGAAATGTACAA 24570810 Query 1455793 AAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTC- 1455851 |||| ||||||||||||| |||||||||||||||||||||||| | | | | | || Sbjct 24570811 GAAAG-CCGAGGCCTCCTTCTGGACCGCCGAGGAGGTCGACCTCT-CTCAGG-ATGTTCG 24570867 Query 1455852 -CACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTT 1455910 ||||||| || | | ||||||| || ||||| ||| || ||||| || || Sbjct 24570868 TCACTGGGAAAACCTAACCCCCGACGAGAAGCACTTCATTTCGCATGTGCTCGCTTTCTT 24570927 Query 1455911 TCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCC 1455970 | || ||| || |||||||| ||||| || ||||| | || ||||| ||||| | Sbjct 24570928 T-GCTGCCTCAGACGGCATCGTTTTGGAGAATCTCGCCGGGAGGTTCATGAAGGAGGTTC 24570986 Query 1455971 AATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTG 1456030 | | ||||||| || || || || |||||||| ||||| || || |||||||| | Sbjct 24570987 AGGTCGCAGAGGCTCGCGCTTTCTATGGCTTCCAGATTGCCATAGAGAATATCCACTCCG 24571046 Query 1456031 AAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCT 1456090 ||| || ||| || |||| ||||| |||| ||||||||||||||| ||| || | Sbjct 24571047 AAATGTATAGCCTCTTGCTCGAAACCTATATCAAAGACCCGGTCGAGAAGAACCGGCTTT 24571106 Query 1456091 TTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGA 1456150 | | |||||||| || || || | ||| || |||||||| ||||| | ||||| Sbjct 24571107 TCCATGCCATCGAGACCGTCCCTTGTGTGGCCAAGAAGGCCGAATGGGCCCTCCGGTGGA 24571166 Query 1456151 TCAACAAGGAGGGCCTCGACAC-TTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGG 1456208 || || ||| ||| | || || ||||| | || | || || |||| |||| Sbjct 24571167 TC------GACGGCACCGAATCGTTCGCGGAGCGTTTGGTTGCTTTCGCTTGCGTGGAGG 24571220 Query 1456209 GCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGC 1456268 | || || || ||||| || |||||||| || |||||||| ||||||||||| | |||| Sbjct 24571221 GGATTTTCTTTTCGGGGAGCTTCTGCGCGATATTTTGGCTGAAGAAGCGCGGGTTGATGC 24571280 Query 1456269 CCGGTCT 1456275 |||| || Sbjct 24571281 CCGGGCT 24571287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177349292147818