Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq9 152 4e-32 >seq9 Length=25348792 Score = 152 bits (168), Expect = 4e-32 Identities = 412/622 (66%), Gaps = 9/622 (1%) Strand=Plus/Minus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGT 4603 || ||||| || || || |||||||| ||||||| || | |||| ||||| || || || Sbjct 24571347 AAGCACGCGAAGTCGCAGTGCAAACCCTCGTCTC-GCGAGATCAACTCGTTCGAGAAAGT 24571289 Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663 | |||||||| || || | ||| || ||||||||||| ||| || ||| ||||| Sbjct 24571288 GAGCCCGGGCATCAACCCGCGCTTCTTCAGCCAAAATATCGCGCAGAAGCTCCCCGAAAA 24571229 Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTC 4723 ||| || || || ||| || || || || || || | ||||||| || || | Sbjct 24571228 GAAAATCCCCTCCACGCAAGCGAAAGCAACCAAACGCTCCGCGAACGATTCGG---TGCC 24571172 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 | ||||| | ||||| | || || || || || || | || | || || Sbjct 24571171 GTCGATCCACCGGAGGGCCCATTCGGCCTTCTTGGCCACACAAGGGACGGTCTCGATGGC 24571112 Query 4784 GTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 | || | | || || | ||||||| ||||| || || | | |||||||| Sbjct 24571111 ATGGAAAAGCCGGTTCTTCTCGACCGGGTCTTTGATATAGGTTTCGAGCAAGAGGCTATA 24571052 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTA-AAAGCATCTAGCTTCTG 4902 |||||| || || ||||| ||||| |||||||| || || || ||||| | ||| |||| Sbjct 24571051 CATTTCGGAGTGGATATTCTCTATGGCAATCTGGAAGCCATAGAAAGC-GCGAGCCTCTG 24570993 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 || ||||| || || || || | | | || || || || ||||| || Sbjct 24570992 CGACCTGAACCTCCTTCATGAACCTCCCGGCGAGATTCTCCAAAACGATGCCGTCTGAGG 24570933 Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCC 5022 | ||||| || || | ||||| || || |||| || ||||| || | || |||| || Sbjct 24570932 CAGCAAAGAAAGCGAGCACATGCGAAATGAAGTGCTTCTCGTCGGGGGTTAGGTTTTCCC 24570873 Query 5023 AGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTT 5082 |||| | | ||| | || | || || || || | ||||| || || || || |||| Sbjct 24570872 AGTGACGAACATCCTGAGAGAGGTCGACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCTT 24570813 Query 5083 TTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA-AATCTGTTGTCG 5141 | |||||||| ||| || | || || || ||||||| || ||| || | || | Sbjct 24570812 TCTTGTACATTTCCCAGATTTGCGGGTATTGGATCGGAAACAT-ACAGAACCGGTCTGGG 24570754 Query 5142 TTAGGTGTAAGAAGCGGTTCTT 5163 || || | ||||| ||||||| Sbjct 24570753 TTCGGAGCCAGAAGTGGTTCTT 24570732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427024674849737