Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq2920 84.2 7e-12 >seq2920 Length=3330 Score = 84.2 bits (92), Expect = 7e-12 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 42756 CATGCTGATCCTGACCAGAAGACCCGGCGAAACCCTGCATATCGGCGACAACATCACCGT 42815 ||||||||| |||||| | | ||| ||||||||| ||||||||| | | ||||| Sbjct 75 CATGCTGATTCTGACCCGCCGGGTCGGTGAAACCCTGATGATCGGCGACGAGGTGACCGT 134 Query 42816 CACGGTCCTTGGCAGCCAGGGCGACCAGGTGCGCCTCGGCATCACCGCCCCGGACGACGT 42875 ||| || || || |||| ||||||||||| ||||||||| || ||| | |||| Sbjct 135 CACTGTTCTGGGTGTGAAGGGTAACCAGGTGCGCATCGGCATCAATGCGCCGAAGAACGT 194 Query 42876 CGCCATCCACCGCTCCGAGATCTACCAGC 42904 ||| | || ||| || || ||||||| Sbjct 195 CGCGGTTCATCGCGAAGAAATTTACCAGC 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160454874512610