Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq1221 82.4 8e-11 >seq1221 Length=14425 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/154 (72%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 120460 CCTGTGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCAT 120519 ||||||| | ||| ||||| || |||| ||| ||| |||||| ||||||| Sbjct 928 CCTGTGC---CAGGGTCGTGGTTCGGCCGCCAACTCCGCCGTCTGCTACGTGCTGGGCAT 984 Query 120520 CACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCG 120579 ||||||||||||||| | | || ||| |||||||||||||| ||| | ||| || Sbjct 985 CACCTCGATCGATCCAGGCCGCAATGATCTGCTGTTCGAGCGCTTCGTCAGTCAGGAGCG 1044 Query 120580 CCCCGACTTTCCCGACATCGACGTCGACTTCCAG 120613 || ||| || |||||||| ||||| ||| || Sbjct 1045 CCGCGAGCCGCCGGACATCGATGTCGATTTCGAG 1078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514993169375800