Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 >seq7 Length=27644224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 23498 TAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAG 23557 ||||||| | || ||||||||||| || ||||| ||||| ||| ||| | ||||| | Sbjct 22709641 TAAACAAGA--CAAGCAAAATCACAGTGCAGGCCCTCATCTCTAGAAATAAGCTCATTTG 22709698 Query 23558 AAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCA 23607 | ||||||| || ||||| || || | ||||||| ||||||||| ||| Sbjct 22709699 AGAATGTTAGACCAGGCATCAAGCCCCTCTTTTTAAGCCAAAATATGGCA 22709748 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 23498 TAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAG 23557 ||||||| | || ||||||||||| || ||||| ||||| ||| ||| | ||||| | Sbjct 22995875 TAAACAAGA--CAAGCAAAATCACAGTGCAGGCCCTCATCTCTAGAAATAAGCTCATTTG 22995818 Query 23558 AAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCA 23607 | ||||||| || ||||| || || | ||||||| ||||||||| ||| Sbjct 22995817 AGAATGTTAGACCAGGCATCAAGCCCCTCTTTTTAAGCCAAAATATGGCA 22995768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521456782424600