Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025. 1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq66718 95.1 1e-14 >seq66718 Length=721455 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243 ||| || ||||||| || | ||| || | ||| | || | ||||| |||| ||| || Sbjct 180496 TCCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATCCC 180555 Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303 |||||||| ||||| || || ||||| || ||| | |||||||| || || ||| Sbjct 180556 ATTGGATGTCCCATTTGTTCCTCGAATATAACTCCCAGTAGCACGAATGTTGTGAACTGA 180615 Query 54304 TAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 54363 | ||| ||||| || || ||| || | || ||| || | ||||||||||| Sbjct 180616 GACACCAATCCCTCCAGCAGATTTGCTTATGACAGCACATTCCTTGAGAGTATCATAGAT 180675 Query 54364 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 54405 ||||| || |||||||| ||||| | || |||||||| Sbjct 180676 TCCCTCAATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 180717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593212943862240