Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025. 1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq54907 86.0 5e-12 >seq54907 Length=1337563 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| |||||| | | || || || || || |||||||| || || || || || Sbjct 281847 GATAAGGAAGGTATCCTGCCTGACCAGCAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAG 281788 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| |||| |||||||||||||||||||| ||||| |||||| |||| || Sbjct 281787 GATGGGCACACTTTGGCTGATTACAATATTCAGAAGGAGTCTACCCTTCACCTGGTCCTA 281728 Query 29175 CGATTACGAGGAGGG 29189 || | ||||| ||| Sbjct 281727 CGCCTCCGAGGTGGG 281713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427978207994390