Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq56172 82.4 6e-11
>seq56172
Length=445662
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||||||||| || || ||| | |||||||| || || ||| | || || || ||
Sbjct 373180 ATGCAGATATTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCA 373239
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | || | ||| |||| || || | || || ||| | || ||||||
Sbjct 373240 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 373299
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| ||| | || | ||| ||||| || || || ||| | ||| || || |||| |
Sbjct 373300 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACTTTGGCGGACTACAAC 373359
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGTCA 25061
|| ||||| ||| |||| ||||| || ||| | || ||||||| || ||
Sbjct 373360 ATCCAGAAGGAGTCCACACTTCACTTGGTGCTCCGTCTGCGCGGTGGCCA 373409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 417954587792960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |