Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq16495 104 2e-17
>seq16495
Length=532983
Score = 104 bits (114), Expect = 2e-17
Identities = 161/229 (70%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| ||||| || | | ||||| |||| ||| ||| || || | |||||||| |
Sbjct 85662 GCCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGC 85603
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGAT-CGGCCG 43000
| ||| || | || || | ||||||||||||||| ||||| ||||| || | ||| |
Sbjct 85602 AAGTGTGCGCCCATCCTCAAGTTGTTTGCCGGCAAAGATCAACCGCTGCTGGTCCGGGGG 85543
Query 43001 GCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| | || || || || |||| | ||||||| || | | |||||| || ||| |
Sbjct 85542 GGATGCCCTCCTTGTCCTAGATCTTCGCTTTGACATTGTCGATCGTGTCGGAAGACTCAA 85483
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || | || || || || ||||| || ||||||||||| ||||||||
Sbjct 85482 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCAT 85434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381051039351204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |