Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq17655 172 1e-37
>seq17655
Length=1090806
Score = 172 bits (190), Expect = 1e-37
Identities = 311/452 (69%), Gaps = 6/452 (1%)
Strand=Plus/Plus
Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348
|| || ||||| ||||||||| | ||||| || || || | || ||||| |||
Sbjct 172394 TTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGCATCTTCTTCTCCGGCTCCTTC 172453
Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408
||||||||||| ||||| ||| || | ||||| |||||| | || ||||||
Sbjct 172454 TGCGCCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCGGGCCTCACCTTCTCCAACGAG 172513
Query 243409 TTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTC 243468
||||| |||||||||||||| ||| | |||| || | || | ||
Sbjct 172514 CTCATCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTACGACATCCTG 172573
Query 243469 CAGAACAAGCT--ACCATTCGAAACG-GTCAAACAAATCATCACAGAAGCAGTTGAAAAC 243525
| |||||| || | || || ||| | ||| || | || || || || | |
Sbjct 172574 CGCGGCAAGCTGGACGAGTCC---CGCGTCTTCGAGATCGTCTCCGAGGCCGTGGACATC 172630
Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTC 243585
|| | ||| ||| | |||||||| | || ||| ||| | ||||||||| || |||
Sbjct 172631 GAGAGGGAGTTCGTCTGCGACGCGCTGCCCTGCGCGCTCGTCGGCATGAACGGCGACCTC 172690
Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645
||| | ||||||||||| ||||| ||||||||| | |||| ||||| || | ||||
Sbjct 172691 ATGAGCCAGTACATCGAGTTCGTGGCCGACCGCCTGCTCATGGCGCTGGGCTGCAAGAAG 172750
Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705
|||||||| ||| ||||| || | || ||||||||||| ||||| || || || ||
Sbjct 172751 CTGTACAACGCCACCAACCCGTTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGACC 172810
Query 243706 AACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
||||||||||| ||||| ||| | || || ||
Sbjct 172811 AACTTCTTCGAGAAGCGCGTCGGCGAGTACCA 172842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1101911513510300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |