Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025.
1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters
Query= NC_014564.2
Length=45413
Score E
Sequences producing significant alignments: (Bits) Value
seq16483 82.4 2e-11
>seq16483
Length=155004
Score = 82.4 bits (90), Expect = 2e-11
Identities = 165/243 (68%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 1114 GCCCCGCGCTCGGGTCTGGCCGCGAAATTTTTGATAGACGTGGGGGCGGGCGTGGTGGAT 1173
|| ||||| ||||| ||||| ||| | ||| |||||||| ||||||||||||||
Sbjct 70851 GCGCCGCGGTCGGGGCTGGCGTGGAAGCACTCGATCGACGTGGGCGCGGGCGTGGTGGAC 70792
Query 1174 CCCGGTTACCGGGGGGAAGTGAAGGTGGTGCTGTTTAACCTGTCGGACCACAATTTCAAC 1233
||| |||||||| || ||| | || || |||| |||||| | | ||| |
Sbjct 70791 GCCGACTACCGGGGCCCCGTCGGGGTCATCCTCTTCAACCACTCGGACGCCGACTTCGCC 70732
Query 1234 GTGCGGGAGGGGGACAGGATCGCGCAGCTGGTTTTGGAGGCGTACTCGGCTCCGCCGACG 1293
||| || |||||| | ||||||||||||| | ||| | ||| | | | ||||
Sbjct 70731 GTGAGGCCCGGGGACCGCGTCGCGCAGCTGGTCATCGAGAGG--ATCGCCACGCCGGACG 70674
Query 1294 --GCGGAGGTGGAGAGCCACGCGGCGACGGAGCGCGGGGACCGCGGGTTCGGGTCGACGG 1351
|| |||||||| || || || || | | || || |||| |||||||| || |
Sbjct 70673 TCGCCGAGGTGGACGACCTCGACGCCACCGTCAGGGGCGAGGGCGGCTTCGGGTCCACCG 70614
Query 1352 GCG 1354
|||
Sbjct 70613 GCG 70611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 145081823353500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |