Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aegilops_20tauschii_20subsp._20tauschii_20[refseq_20GCF_5F001957025. 1_202017-01-19] 68,538 sequences; 4,327,321,625 total letters Query= NC_014564.2 Length=45413 Score E Sequences producing significant alignments: (Bits) Value seq16483 82.4 2e-11 >seq16483 Length=155004 Score = 82.4 bits (90), Expect = 2e-11 Identities = 165/243 (68%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1114 GCCCCGCGCTCGGGTCTGGCCGCGAAATTTTTGATAGACGTGGGGGCGGGCGTGGTGGAT 1173 || ||||| ||||| ||||| ||| | ||| |||||||| |||||||||||||| Sbjct 70851 GCGCCGCGGTCGGGGCTGGCGTGGAAGCACTCGATCGACGTGGGCGCGGGCGTGGTGGAC 70792 Query 1174 CCCGGTTACCGGGGGGAAGTGAAGGTGGTGCTGTTTAACCTGTCGGACCACAATTTCAAC 1233 ||| |||||||| || ||| | || || |||| |||||| | | ||| | Sbjct 70791 GCCGACTACCGGGGCCCCGTCGGGGTCATCCTCTTCAACCACTCGGACGCCGACTTCGCC 70732 Query 1234 GTGCGGGAGGGGGACAGGATCGCGCAGCTGGTTTTGGAGGCGTACTCGGCTCCGCCGACG 1293 ||| || |||||| | ||||||||||||| | ||| | ||| | | | |||| Sbjct 70731 GTGAGGCCCGGGGACCGCGTCGCGCAGCTGGTCATCGAGAGG--ATCGCCACGCCGGACG 70674 Query 1294 --GCGGAGGTGGAGAGCCACGCGGCGACGGAGCGCGGGGACCGCGGGTTCGGGTCGACGG 1351 || |||||||| || || || || | | || || |||| |||||||| || | Sbjct 70673 TCGCCGAGGTGGACGACCTCGACGCCACCGTCAGGGGCGAGGGCGGCTTCGGGTCCACCG 70614 Query 1352 GCG 1354 ||| Sbjct 70613 GCG 70611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145081823353500